| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4573 |
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| Symbol | |
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| ID | 5192912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5115987 |
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| End bp | 5118092 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589053 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001269877 |
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| Protein GI | 148549775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.348013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.924419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TAATCAAGAC TTTCCAGTTC GGTCAATCGA CCGTCACTCT CGAAACGGGC
CGTATTGCCC GTCAGGCAAC CGGCGCCGTG CTGGTTACCG TCGACAACGA CGTCACCGTG
CTGGTGACTG TGGTAGGCGC CAAACAGGCT GATCCAGGCA AGGGTTTCTT CCCGCTGTCG
GTTCACTACC AGGAAAAGAC CTACGCCGCT GGCAAGATCC CAGGTGGCTT CTTCAAGCGT
GAAGGCCGTC CTTCCGAGAA AGAGACGCTG ACCTCGCGCC TGATCGACCG TCCGATCCGT
CCGCTGTTCC CGGAAGGCTT CATGAACGAA GTGCAGGTCG TCTGCACCGT GGTTTCCACC
AGCAAGAAGA CCGACCCGGA CATCGCTGCG ATGATCGGTA CCTCGGCTGC CCTGGCCATT
TCCGGTATTC CGTTCGAAGG CCCGATCGGC GCTGCCCGCG TTGCCTTCCA CGAAAGCACT
GGCTACCTGC TGAACCCGAC CTACGAGCAA CTGGCTGCCT CGAGCCTGGA CATGGTCGTT
GCCGGTACCT CCGACGCCGT ACTGATGGTT GAATCGGAAG CTCAAGAGCT GACCGAAGAC
CAGATGCTGG GTGCCGTACT GTTCGCCCAC GACGAATTCC AGGCTGTTAT CCAGGCTGTC
AAAGAGCTGG CTGCCGAAGC TGGCAAGCCG ACTTGGGACT GGAAACCTGC CGTTGCCAAC
ACCGAGCTGT TCAATGCTAT CCGCGCCGAG TTCGGCGAAG CGGTTTCGCA GGGCTACACC
ATCACCGTCA AAGCCGACCG CTATGCGCGT CTGGGTGAGC TGCGTGACCA GGCGGTTGCC
AAGTTCTCCG GTGAAGAAGG CCAGCCTTCG GCTTCCGAAG TAAAAGACAT CTTCGGCGAA
ATCGAATACC GCACCGTTCG CGAAAACATC GTCAACGGCA AGCCACGTAT CGACGGCCGC
GACACCAAGA CTGTGCGTCC GCTGAACATC GAAGTGGGTG TGCTGCCGAA AACTCACGGT
TCGGCACTGT TCACCCGTGG CGAAACCCAG GCCCTGGTCG TTGCGACCCT GGGTACTGCC
CGTGATGCCC AGCTGCTGGA CACCCTCGAA GGCGAGAAGA AAGACCCCTT CATGCTGCAC
TACAACTTCC CACCGTTCTC GGTAGGTGAG TGTGGCCGCA TGGGCGGTGC TGGCCGTCGC
GAAATCGGCC ACGGCCGTCT GGCCCGCCGT TCGGTTCAGG CCATGCTGCC TGCTGCTGAC
GTGTTCCCGT ACACCATCCG TGTGGTTTCG GAAATCACCG AATCCAACGG TTCCAGCTCC
ATGGCTTCGG TCTGCGGTGC TTCCCTGGCC CTGATGGACG CCGGTGTGCC GATGAAGGCG
CCAGTTGCCG GTATCGCCAT GGGCCTGGTC AAGGAAGGCG ACAAGTTCGC AGTCCTGACT
GACATCCTGG GTGACGAAGA CCACCTGGGC GACATGGACT TCAAGGTAGC CGGTACCGCC
AAAGGCGTCA CCGCGCTGCA GATGGACATC AAGATCAACG GCATCACCGA AGAGATCATG
GAAATCGCCC TGGGCCAAGC CCTGGAAGCG CGCCTGAACA TCCTCGGCCA GATGAACCAG
GTCATTGGCC AGTCGCGTAC CGAACTGTCG GCCAACGCCC CGACCATGAT CGCGATGAAG
ATCGACACCG ACAAGATCCG TGACGTCATC GGTAAAGGCG GCGCCACCAT TCGCGCCATC
TGCGAAGAGA CCAAGGCTTC GATCGACATC GAAGACGACG GCTCGATCAA GATCTTCGGC
GAAACCAAGG AAGCGGCAGA TGCTGCCAAG CAGCGCATCC TGGGCATCAC CGCCGAGGCC
GAGATCGGCA AGATCTACGT CGGCAAGGTC GAGCGCATTG TCGATTTCGG CGCCTTCGTC
AACATCCTGC CTGGCAAGGA CGGCCTGGTG CACATCTCCA TGCTGAGCGA TGCTCGCGTC
GAGAAAGTCA CCGACATCCT CAAAGAAGGC CAGGAAGTCG AAGTGCTGGT ACTGGACGTA
GACAACCGCG GCCGTATCAA GCTGTCGATC AAAGACGTTG CTGCGGCCAA GGCCTCGGGC
GTCTAA
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| Protein sequence | MNPVIKTFQF GQSTVTLETG RIARQATGAV LVTVDNDVTV LVTVVGAKQA DPGKGFFPLS
VHYQEKTYAA GKIPGGFFKR EGRPSEKETL TSRLIDRPIR PLFPEGFMNE VQVVCTVVST
SKKTDPDIAA MIGTSAALAI SGIPFEGPIG AARVAFHEST GYLLNPTYEQ LAASSLDMVV
AGTSDAVLMV ESEAQELTED QMLGAVLFAH DEFQAVIQAV KELAAEAGKP TWDWKPAVAN
TELFNAIRAE FGEAVSQGYT ITVKADRYAR LGELRDQAVA KFSGEEGQPS ASEVKDIFGE
IEYRTVRENI VNGKPRIDGR DTKTVRPLNI EVGVLPKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GEKKDPFMLH YNFPPFSVGE CGRMGGAGRR EIGHGRLARR SVQAMLPAAD
VFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPMKA PVAGIAMGLV KEGDKFAVLT
DILGDEDHLG DMDFKVAGTA KGVTALQMDI KINGITEEIM EIALGQALEA RLNILGQMNQ
VIGQSRTELS ANAPTMIAMK IDTDKIRDVI GKGGATIRAI CEETKASIDI EDDGSIKIFG
ETKEAADAAK QRILGITAEA EIGKIYVGKV ERIVDFGAFV NILPGKDGLV HISMLSDARV
EKVTDILKEG QEVEVLVLDV DNRGRIKLSI KDVAAAKASG V
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