| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4567 |
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| Symbol | |
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| ID | 5194703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5108559 |
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| End bp | 5110493 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589047 |
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| Product | acetyl-CoA synthetase |
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| Protein accession | YP_001269871 |
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| Protein GI | 148549769 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0933221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA TCCGCAAATA CCCCCAAGCC CTGGCCGTCA GCCAGTCCGC CGCCCTCACC
CCCGAAGACT ACCGCCGCCT CTACCGCCAG TCGGTCGAAG ACCCAGACAC CTTCTGGGCC
GAACAGGCCA AACGTCTGGA CTGGATCAAG CCTTGGTCAA GCGTGCAGCA ATGCGACCTG
CATACCGGCA AGGCCCGCTG GTTCGACGGT GCGCAACTCA ACGTCAGCTA CAACTGCATC
GACCGTCATC TGGCCCAGCG CGGCGAGCAA ACGGCCCTGC TGTGGGAAGG CGACGACCCC
AAGGATTCCA AGGCCATCAC CTATCGCGAA CTGCACCGTG AGGTCTGCCG CCTGGCCAAC
GCAATGAAAG CGCGCGGTGT GAAGAAAGGC GACCGGGTGT GCATCTACAT GCCAATGATT
CCCGAGGCCG CCTTCGCCAT GCTCGCCTGC ACCCGCATCG GCGCCATCCA CTCGGTAGTG
TTCGGCGGTT TCTCCCCCGA TGCCTTGCGA GACCGTATTC TCGATGCCGA CTGCCGCACC
GTGATCACCG CCGATGAAGG CGTGCGTGGC GGCAAACGCA TCCCGCTGAA ACAGAACGTC
GACAAGGCCC TGGCCAGCTG CCCTGCGGTC AGTAGCGTAT TGGTGGTGCG TCGCACTGGC
GGCGATGTTG CGTGGACCGA GGGCCGCGAC CTCTGGTATC ACGAAGCGAC GAAGGATGCC
GGCGACGACT GCCCCCCAGA ACCGATGGAG GCCGAAGACC CGCTGTTCAT CCTCTACACC
TCCGGCAGCA CCGGCAAACC CAAAGGGGTG CTGCATACCA CCGGCGGCTA CCTGCTGCAG
GCAACGATGA CCTTCAAGGT GGTGTTCGAT TATCGTGACG GCGAGGTGTT CTGGTGCACC
GCCGATGTCG GCTGGGTGAC TGGCCACAGC TACATCGTCT ACGGCCCGCT GGCCAATGGC
GCAATCTCGC TGATGTTCGA AGGCGTGCCC AACTACCCGG ATACCTCGCG CTTCTGGCAG
GTGGTGGACA AACACCAGGT GAACATCTTC TACACCGCCC CGACCGCCCT GCGCGCACTG
ATGCGCGAGG GCTCTGCGCC ACTGCAGGGC ACCTCACGCA AAAGCCTGCG CCTGCTGGGC
AGCGTCGGCG AGCCGATCAA CCCGGAAGCC TGGGAATGGT ATTTCGAGGA GGTCGGGCAG
AAGCGCTGCC CGATTGTGGA TACCTGGTGG CAGACCGAAA CCGGCGGCAT CATGCTCACC
CCGCTGCCCG GCACGCAGTC ACTCAAACCC GGCTGCGCTA CCCAGCCAAT GTTCGGCGTG
CAGCCGGTGC TACTGGACGA AAAAGGCAAA CTGATCGAAG GCCCCGGCGC CGGCGTGCTG
GCGATCAAAG CCAGCTGGCC GGGGCAGATC CGCAGTGTCT ACGGCGACCA CCAGCGGATG
GTCGACACCT ACTTCAAGCC CTTGCCCGGC TACTACTTCA CAGGCGACGG TGCCCGCCGC
GATGCCGATG GCGACTACTG GATCACCGGG CGCATCGACG ATGTGATCAA CGTATCCGGG
CACCGCATCG GCACCGCTGA AGTGGAAAGC GCACTTGTGC TGCATGACAG CGTGGCCGAA
GCCGCGGTGG TCGGTTATCC CCACGACCTC AAGGGCCAAG GCGTCTACGC CTTCGTCACG
ACCATGAATG GCGTGACACC AGATGACACG CTAAAAGCCG AGCTGCTGGC CCTGGTCAGC
AAGGAAATCG GCAGCTTCGC CAAGCCTGAG CTGATTCAGT GGGCGCCAGC GCTACCCAAG
ACGCGCTCAG GCAAGATCAT GCGGCGTATA CTGCGCAAAA TCGCCTGCAA TGAGCTGGAA
AACCTGGGCG ATACCTCGAC CCTGGCCGAC CCAAGCGTGG TACAGGGCCT GATCGACAAA
CGCCTCAACC AGTAA
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| Protein sequence | MFDIRKYPQA LAVSQSAALT PEDYRRLYRQ SVEDPDTFWA EQAKRLDWIK PWSSVQQCDL
HTGKARWFDG AQLNVSYNCI DRHLAQRGEQ TALLWEGDDP KDSKAITYRE LHREVCRLAN
AMKARGVKKG DRVCIYMPMI PEAAFAMLAC TRIGAIHSVV FGGFSPDALR DRILDADCRT
VITADEGVRG GKRIPLKQNV DKALASCPAV SSVLVVRRTG GDVAWTEGRD LWYHEATKDA
GDDCPPEPME AEDPLFILYT SGSTGKPKGV LHTTGGYLLQ ATMTFKVVFD YRDGEVFWCT
ADVGWVTGHS YIVYGPLANG AISLMFEGVP NYPDTSRFWQ VVDKHQVNIF YTAPTALRAL
MREGSAPLQG TSRKSLRLLG SVGEPINPEA WEWYFEEVGQ KRCPIVDTWW QTETGGIMLT
PLPGTQSLKP GCATQPMFGV QPVLLDEKGK LIEGPGAGVL AIKASWPGQI RSVYGDHQRM
VDTYFKPLPG YYFTGDGARR DADGDYWITG RIDDVINVSG HRIGTAEVES ALVLHDSVAE
AAVVGYPHDL KGQGVYAFVT TMNGVTPDDT LKAELLALVS KEIGSFAKPE LIQWAPALPK
TRSGKIMRRI LRKIACNELE NLGDTSTLAD PSVVQGLIDK RLNQ
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