| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4562 |
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| Symbol | |
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| ID | 5190790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5102724 |
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| End bp | 5104106 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589042 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_001269866 |
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| Protein GI | 148549764 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00263697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAGA AGCTGTTCCA GTCTTTCCGC CCGCCCGTAC CGGGCCCGCA CCACAGGCGC
ACCACGCCCG AGGTGATCAA CAAGAGCCAG CACTCGCTGC AGCGCCACCA GTTCAGCCGT
CATGCGGTGA ACATCGTGGA GCGCCTGCAA AGCGCCGGCT ACCAGGCTTA CCTGGTCGGT
GGCTGTGTCC GCGACCTGAT GCTGGGCATC ACGCCGAAGG ACTTCGACGT CGCCACCAGC
GCCACCCCCG AACAGGTCCG TGCCGAGTTC CGCAACGCCC GCATCATTGG TCGTCGCTTC
AAATTGGTCC ATGTGCATTT CGGCCGTGAG ATCATTGAAG TCGCCACCTT CCGCGCCCAC
CACTCCGAGG ACGACCAGGG CGATGCCCAC CGTTCGTCGC ATAACGCCAG TGGCCGCATT
CTGCGAGACA ACGTGTACGG CACCCTGGAA GAGGACGCGC AACGCCGCGA CTTCACCATC
AACGCCCTGT ACTACGATCC GGTCAGCGAG CGCATTCTCG ATTACGCCAA CGGTGTGCAC
GACGTGCGCA ATCGCCTGCT GCGGCTGATC GGGGACCCGA CCCACCGCTA CCAGGAAGAC
CCGGTGCGCA TGCTGCGCGC GGTGCGCTTT GCCGCCAAGC TCGACTTTGG CATCGAAAAG
CACACTTACC TGCCGATTCG CGGTCTGGCC CCGATGCTGC GCGAAATTCC ACCCGCGCGC
CTGTTCGAGG AATGCCTCAA GCTGTTCCTC AGCGGCCAAG GTGCCATCGC CTTCGAAATG
CTGGTTGACC TGGAGTTGTT CGAACCGCTG TTCCCGGCCA GTGCCCACGC GCTGGATGAG
CGGCCGACCT ACACCCACAC GCTGATCAGC CAGGCACTGA ACAACACCGA CCTGCGCGTG
AAGCAGGGCA AGCCGGTGAC GCCAGCCTTC CTGTTTGCTG CTCTGCTCTG GCCAGCTCTG
CCGGCCCGTG TGCTGCACCT GCAGAACCAG GGCGTGCCGC CGATCCCGGC CATGAACGGT
GCAGCCCACG ACCTGATCGC CGAGCAGTGC GCGCGCATTG CCATCCCCAA GCGTTTCACC
CTGCCGATCC GCGAGATCTG GGACATGCAG GAGCGCCTGC CGCGCCGCAG CGGCAAGCGC
GCCGACATGC TGCTGGACAA CCCGCGTTTC CGCGCCGGTT ACGACTTCCT GCTGCTGCGT
GAAAGCGCCG GGGAAGAAAC CGACGACCTG GGCCAGTGGT GGACCGATTA CCAGGAGGCA
AACGACAGCG AGCGCCGCGA GATGATCCGC GAGCTTGGTA GCCGTGACGA CAGTGCCGGC
CCGCGCAAGC GCAAGCGCAG CGGCAGCAAA CGCAAGCGCA GTGGCGACGA GGCGTTCGAG
TGA
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| Protein sequence | MLKKLFQSFR PPVPGPHHRR TTPEVINKSQ HSLQRHQFSR HAVNIVERLQ SAGYQAYLVG
GCVRDLMLGI TPKDFDVATS ATPEQVRAEF RNARIIGRRF KLVHVHFGRE IIEVATFRAH
HSEDDQGDAH RSSHNASGRI LRDNVYGTLE EDAQRRDFTI NALYYDPVSE RILDYANGVH
DVRNRLLRLI GDPTHRYQED PVRMLRAVRF AAKLDFGIEK HTYLPIRGLA PMLREIPPAR
LFEECLKLFL SGQGAIAFEM LVDLELFEPL FPASAHALDE RPTYTHTLIS QALNNTDLRV
KQGKPVTPAF LFAALLWPAL PARVLHLQNQ GVPPIPAMNG AAHDLIAEQC ARIAIPKRFT
LPIREIWDMQ ERLPRRSGKR ADMLLDNPRF RAGYDFLLLR ESAGEETDDL GQWWTDYQEA
NDSERREMIR ELGSRDDSAG PRKRKRSGSK RKRSGDEAFE
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