| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4561 |
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| Symbol | |
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| ID | 5192067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5100313 |
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| End bp | 5101755 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589041 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001269865 |
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| Protein GI | 148549763 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.601271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000975449 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCACA TTCTGATCGT CGAAGACGAA ACCATCATCC GCTCGGCCCT GCGTCGCCTG
CTTGAGCGGA ACCAGTACCA GGTCAGCGAG GCCGGCTCGG TGCAGGAAGC CCAGGAACGC
TTCAGCATTG CCACTTTCGA CCTCATCGTC AGCGACCTGC GCCTGCCAGG CGCGCCCGGC
ACCGAGCTGA TCAAGCTCGG CCAAGGCACC CCGGTGCTGA TCATGACCAG TTACGCCAGC
CTGCGCTCAG CGGTGGACTC GATGAAAATG GGCGCGGTGG ACTACATCGC CAAGCCCTTC
GACCATGACG AGATGCTGCA GGCAGTAGCG CGTATTCTGC GTGACCGGCA GAACGCCCCC
GCTGCTGCAC CGCCTGCCGA GCCACGCGCA AGCAATGGCA AGGCTACAGC GTCCGACAAA
GGCAGCGCGG CAACGGCCAA TGGCGAGATC GGTATCATCG GCTCGTGCCA GCCCATGCAG
GACATGTACA GCAAGATCCG CAAAGTCGCG CCTACCGACT CCAATGTGCT GATCCAGGGC
GAGTCCGGCA CCGGTAAAGA GTTGGTGGCC CGCGCCCTGC ACAACCTGTC TCGCCGGGCC
AAGGCACCGA TGATCTCGGT GAACTGCGCG GCCATCCCCG AAACGCTGAT CGAATCTGAA
CTGTTCGGCC ACGAAAAAGG CGCGTTCACC GGCGCCAGCG CCGGGCGCGC CGGCTTGGTG
GAGGCCGCCG ATGGCGGTAC GCTGTTCCTC GATGAAATTG GCGAACTGCC GCTGGAAGCC
CAGGCTCGCC TGCTGCGTGT GCTGCAGGAA GGCGAGATAC GCCGGGTAGG TTCGGTGCAG
TCGCAAAAGG TCGATGTGCG CCTGATCGCC GCGACCCACC GCGACCTGAA AAACCTGGCC
AAGGCCGGCC AGTTCCGTGA AGACTTGTAT TACCGACTGC ACGTCATCGC CCTGAAGCTG
CCGGCCCTGC GCGAGCGTGG CAGCGACGTC AACGAGATCG CCAGCGTCTT CCTCGCCCGC
CAAAGTGCTC GCATCGGCCG CGACGACCTG CACTTCTCGG CCGAGGCCGA GCAAGCCATT
CGTCACTACA GCTGGCCCGG TAACGTGCGA GAACTGGAAA ACGCCGTGGA GCGCGCGGTG
ATTCTCAGCG AGAGCGCAGA AATTTCCGCC GAGCTGCTGG GCATCGACAT CGAGCTGAGC
GACCTGGAAG AGGATGACAT CCTCGACAAT GCCCTGGTGG TGGCCAACGC AGGCAATGCC
AGCCACGAGC CGACCGAAGA CCTGTCGCTG GAAGACTACT TCCAGCACTT CGTGCTTGAG
CACCAGGACC ACATGACCGA GACCGAACTG GCACGCAAGC TCGGCGTCAG CCGCAAGTGC
CTGTGGGAAC GCCGCCAACG CCTGGGCATA CCACGGCGCA AGAGCAACGC TACCAGCGAA
TAA
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| Protein sequence | MPHILIVEDE TIIRSALRRL LERNQYQVSE AGSVQEAQER FSIATFDLIV SDLRLPGAPG
TELIKLGQGT PVLIMTSYAS LRSAVDSMKM GAVDYIAKPF DHDEMLQAVA RILRDRQNAP
AAAPPAEPRA SNGKATASDK GSAATANGEI GIIGSCQPMQ DMYSKIRKVA PTDSNVLIQG
ESGTGKELVA RALHNLSRRA KAPMISVNCA AIPETLIESE LFGHEKGAFT GASAGRAGLV
EAADGGTLFL DEIGELPLEA QARLLRVLQE GEIRRVGSVQ SQKVDVRLIA ATHRDLKNLA
KAGQFREDLY YRLHVIALKL PALRERGSDV NEIASVFLAR QSARIGRDDL HFSAEAEQAI
RHYSWPGNVR ELENAVERAV ILSESAEISA ELLGIDIELS DLEEDDILDN ALVVANAGNA
SHEPTEDLSL EDYFQHFVLE HQDHMTETEL ARKLGVSRKC LWERRQRLGI PRRKSNATSE
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