| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4557 |
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| Symbol | |
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| ID | 5193312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5095531 |
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| End bp | 5095977 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640589037 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_001269861 |
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| Protein GI | 148549759 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.195272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000457182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACCC TAGAAAAGCA AAAAGCCAAC CAGAATCTTT ATGGGGTTGC ACCCTATCAG
GAGACCAAGG GTGAGGAGTA CATGGGTGAG CCCATGCGCA AGCACTTCAC CAAGATCCTC
ACTGGCTGGA AGCAAGAGCT GATGGTCGGC GTCGACAAGA CCGTTGACCA TATGAAAGAA
GAAGCAGCCA ACTTCGCAGA TCCCGCAGAC CGCGCATCCC AGGAAGAGGA GTTTGCCCTC
GAACTGCGCA ACCGCGACCG CGAGCGCAAG CTGATCAAGA AAATCGATAA AACCCTGCAG
AAGATTCAGG ACGAAGAGTA CGGCTGGTGC GAGTCGTGCG GCATCGAGAT CGGCTTGCGC
CGCCTGGAAG CCCGCCCTAC CGCCGACCTG TGCTTCGACT GCAAGGAAAT TGCCGAGAAA
AAGGAAAAAA CGGTCGGCAA AGGCTGA
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| Protein sequence | MSTLEKQKAN QNLYGVAPYQ ETKGEEYMGE PMRKHFTKIL TGWKQELMVG VDKTVDHMKE
EAANFADPAD RASQEEEFAL ELRNRDRERK LIKKIDKTLQ KIQDEEYGWC ESCGIEIGLR
RLEARPTADL CFDCKEIAEK KEKTVGKG
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