| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4555 |
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| Symbol | |
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| ID | 5192647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5093435 |
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| End bp | 5094148 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589035 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001269859 |
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| Protein GI | 148549757 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.925767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000844744 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTTCT CTCCTTCACT CGAGCAGGGC CGCCTGTTGC GTCGCTACAA GCGCTTTCTG
GCCGATATCG AACTGGCCAG CGGCGAGCAG ATGACTATCC ACTGCCCGAA TACCGGCTCC
ATGCTCAACT GCATGCGTGA AGGTGGGCAG GTGTGGTTCA GCCGCTCCAA CGACCCCAAG
CGCAAGCTGC CAGGGACCTG GGAAATCAGC GAAACCCCCC AGGGGCGGTT GGCCTGCGTG
AATACCGGGC GGGCCAATGC GTTGGTCGAA GAGGCCCTGC GCGCCGGCAC AATCACTGAA
CTGGTCGGTT TCACTGCACT CAAGCGTGAA GTGGCCTATG GCGAAGAAGG CAGCCGTATC
GACTTTCGCC TGGAGTTCGA GGGTGCCCCG GCCTATGTCG AGGTCAAGAG TGTGACGCTG
GGCTACCCCG ACACTGCAGT TGCGGCCTTC CCTGATGCGG TGACTCAACG CGGTGCGAAA
CACCTGCGTG AGCTGGCAAA GCTGGCCCGG CAGGGCGTGC GGGCCGTGCA GCTGTATTGC
GTGAACCTGA CCGGTATCGA CGCTGTGCGC CCGGCTGAAG AAATTGATAC AGCCTACGCC
CAGGCGCTGC GCGCTGCCGT AGCGGACGGG GTGGAGGTGC TGGCCTACGG CACTCGGCTG
GACGCCGAGG GTATCGTCAT CGATCGCCGC TTGCCGGTGC TGCTTACCCC ATGA
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| Protein sequence | MRFSPSLEQG RLLRRYKRFL ADIELASGEQ MTIHCPNTGS MLNCMREGGQ VWFSRSNDPK
RKLPGTWEIS ETPQGRLACV NTGRANALVE EALRAGTITE LVGFTALKRE VAYGEEGSRI
DFRLEFEGAP AYVEVKSVTL GYPDTAVAAF PDAVTQRGAK HLRELAKLAR QGVRAVQLYC
VNLTGIDAVR PAEEIDTAYA QALRAAVADG VEVLAYGTRL DAEGIVIDRR LPVLLTP
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