Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4550 |
Symbol | |
ID | 5192008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5089305 |
End bp | 5090189 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589030 |
Product | hypothetical protein |
Protein accession | YP_001269854 |
Protein GI | 148549752 |
COG category | [S] Function unknown |
COG ID | [COG3016] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000869359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000103556 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGACACC CGATGCTGTC CGGTTTCTCG CTGTGCCTGG TACTGGCGAT AGGCGGCTGT CAGGCCAGCC TGCCGCCGTT GCCCGCCTGG CAGAGCAGTG AAGGTCGCAC GCACGCCGAG CTGGGAAAGA TTGTCGACCT GTCCAATGAG CAGGTCATAA GCCCTGAAAC GCTGGTGCAG CGCCTGGCTG ATGCGCCCCG AGTGCTTGTC GGCGAGAAGC ATGACAACCC TGACCATCAC GCGCTGCAAC TGTGGCTGCT GCGCGCTCTT CAAGGCCAGC GCACTCAGGG CAGCCTGTTG CTGGAGATGC TGCAGCCCAG CCAGCAATCG CGGGTGGACA AGCTGGTGGG GCAGCCTTTG CCGGAAGACT TGCCCAAGGC ACTGGCCTGG CAGGAGGGCT GGGATTGGCA GTTGTACGGG CCGATTGTCA CCGAAGCCTT GCAGCATGGG GTGACGTTGC TGGCCGCCAA CCTTTCGCCC GCCGAGATGC GTCAGGCCTA TCGACAGCCG GCGCCGGTGC AGGGCGAAAA GTCCAATGCA CCCGCGGTAA AGGCTGCCTT GCTGGAACAG GTGCGCGCCG GGCATTGCGG GATGCTGCCG GAAAACCAGT TACCGGCGAT GCTGGCCGTT CAGCAGCAGC GCGACCGGCG CATGGCCGAG CGCTTGCAGG CGGCACCGCA ACCGGCACTG CTGTTTGCCG GGGCTTACCA TGTGCGCAAG GACCTGGGCA TACCCTTGCA TCTGGCTGAC CTGGGGGCGA CGGGGGAGAG CAAGGTATTG CTGCTGGCTG AGGTGGGCGA GCGAATCGAG CCTGGCGAGG CTGATTATGT GTGGTACACG GCGGCGATGC CGGAGCAGGA TTATTGTGCG CAGCTGCGGC GTTGA
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Protein sequence | MRHPMLSGFS LCLVLAIGGC QASLPPLPAW QSSEGRTHAE LGKIVDLSNE QVISPETLVQ RLADAPRVLV GEKHDNPDHH ALQLWLLRAL QGQRTQGSLL LEMLQPSQQS RVDKLVGQPL PEDLPKALAW QEGWDWQLYG PIVTEALQHG VTLLAANLSP AEMRQAYRQP APVQGEKSNA PAVKAALLEQ VRAGHCGMLP ENQLPAMLAV QQQRDRRMAE RLQAAPQPAL LFAGAYHVRK DLGIPLHLAD LGATGESKVL LLAEVGERIE PGEADYVWYT AAMPEQDYCA QLRR
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