Gene Pput_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4548 
Symbol 
ID5190711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5087087 
End bp5088688 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content62% 
IMG OID640589028 
Producthypothetical protein 
Protein accessionYP_001269852 
Protein GI148549750 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0645] Predicted kinase
[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00671326 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000171948 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGCATT CGAATTCCCT TGCCCCGGAA GGATTTGCCG TGAGCCAAGC TCTTATTACT 
GCGTTGCAGA ACCCTGCCCT GTACCCTCAC CCCGTGGAGG GGTTTCAGCT CATCGAGACG
CATATCTCCT GGGTCCTGCT CACTGGCGAA TACGCCTACA AGATCAAGAA ACCGATGAAT
TTCGGCTTCC TGGACTTCAC CGGACTGGAC CAGCGCCAGC ATTTCTGTAA CGAAGAATTG
CGCCTGAACC AACGCCTGAC CGAAGGCCTG TACCTGGAAG TGTTGCCCAT CACCGGTAGC
GTCGACGCAC CGCAGATCGG TGGCGAAGGC GTAGCCATCG AGTACGCGCT GAAGATGCGC
CAGTTCCCCC AAGGGCAGAT GCTCAACACC CTGCAGGCCA ATGGCGAACT GAACGCCACG
CACATCGACC AGATGGCCCG GCAGATTGCC GATTTTCACC TTCAGGCTCC GCGTGTGCCG
ATGGAGCACC CGCTGGGCAC GCCAGAGAGC GTGATGGCCC CGGTGGAGCA GAACTTCGAG
CAAATTCGCC CATTCCTCAG CGACAAAGCC GATCTGCAGC AACTTGACGC CCTGCAGGCC
TGGGCCCGCA GCAGCTTCGA GCGCCTGCAA GGGCTGCTGG AAAAGCGCAA GGCCAATGGC
TTCATCCGTG AGTGCCACGG TGACATTCAC CTGGGCAACG CCACCTTGAT CGATGGCAAG
GTGGTTATCT TCGATTGCAT CGAATTCAAC GAGCCTTTCC GACTGACCGA CGTCTACGCC
GACACCGCCT TCCTGGCCAT GGACCTGGAA GACCGTGGCC TGAAGTGCCT GGCCCGACGC
TTCATCAGCC AGTACCTGGA ACTGACAGGG GACTACGAAG GCCTGGAACT GCTCAACTTC
TACAAAGCCT ACCGCGCGCT GGTGCGGGCC AAGGTCGCAC TGTTCAGCAT GCCGGCCGAC
GCCGATGGCG TGCAACGTGC CACCACCCTG CGCACCTACC GCAACTACGC CAACCTGGCC
GAAAGTTACA GCGCCATCCC GTCGCGCCTG CTGGCCATCA CCCATGGTGT TTCGGCGGTG
GGGAAAAGTC ACGTGGCCAT GCGCCTGGTC GAGGCCTTGG GTGCAGTGCG CGTGCGTTCG
GACGTAGAGC GCAAGCGCCT GTTCGGCGAA CAACAGCAGG CCGACGCCGG CCAACTGAGC
ACAGGCATCT ATGACCAGGA CGCCAGCGCT GCGACCTATC TGCGCCTGCA CGAGATAGCT
GCGACCGTGC TGCGCGCCGG CTTCCCGGTG GTGCTGGACG CCACCTACCT CAAGCGTGAA
CAACGCCAGG CTGCGGCAGA GGTTGCCAGC CAGACCGGCG TGCCGTTCCT CATCCTCGAC
TGCCACGCGC CAGAGGCGGT CATCGCCAGT TGGCTGGAGC AGCGCCAGGC TGAAAACAGC
GACCCCTCGG ATGCCACGCT GGAGGTGATC AAGGCCCAGC AGGCCAGCCG TGAGGCGCTG
GATGCGCAGG AGCTGGTGCA CAGCACCCGC GTCGATACCC AGGCTGCCGG CAGCATGGAT
CAAGTGATCG AGCAGATTCG CCAGCGGTTG CCTGGCCTGT AA
 
Protein sequence
MAHSNSLAPE GFAVSQALIT ALQNPALYPH PVEGFQLIET HISWVLLTGE YAYKIKKPMN 
FGFLDFTGLD QRQHFCNEEL RLNQRLTEGL YLEVLPITGS VDAPQIGGEG VAIEYALKMR
QFPQGQMLNT LQANGELNAT HIDQMARQIA DFHLQAPRVP MEHPLGTPES VMAPVEQNFE
QIRPFLSDKA DLQQLDALQA WARSSFERLQ GLLEKRKANG FIRECHGDIH LGNATLIDGK
VVIFDCIEFN EPFRLTDVYA DTAFLAMDLE DRGLKCLARR FISQYLELTG DYEGLELLNF
YKAYRALVRA KVALFSMPAD ADGVQRATTL RTYRNYANLA ESYSAIPSRL LAITHGVSAV
GKSHVAMRLV EALGAVRVRS DVERKRLFGE QQQADAGQLS TGIYDQDASA ATYLRLHEIA
ATVLRAGFPV VLDATYLKRE QRQAAAEVAS QTGVPFLILD CHAPEAVIAS WLEQRQAENS
DPSDATLEVI KAQQASREAL DAQELVHSTR VDTQAAGSMD QVIEQIRQRL PGL