Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4548 |
Symbol | |
ID | 5190711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5087087 |
End bp | 5088688 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589028 |
Product | hypothetical protein |
Protein accession | YP_001269852 |
Protein GI | 148549750 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0645] Predicted kinase [COG2187] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00671326 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000171948 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGCATT CGAATTCCCT TGCCCCGGAA GGATTTGCCG TGAGCCAAGC TCTTATTACT GCGTTGCAGA ACCCTGCCCT GTACCCTCAC CCCGTGGAGG GGTTTCAGCT CATCGAGACG CATATCTCCT GGGTCCTGCT CACTGGCGAA TACGCCTACA AGATCAAGAA ACCGATGAAT TTCGGCTTCC TGGACTTCAC CGGACTGGAC CAGCGCCAGC ATTTCTGTAA CGAAGAATTG CGCCTGAACC AACGCCTGAC CGAAGGCCTG TACCTGGAAG TGTTGCCCAT CACCGGTAGC GTCGACGCAC CGCAGATCGG TGGCGAAGGC GTAGCCATCG AGTACGCGCT GAAGATGCGC CAGTTCCCCC AAGGGCAGAT GCTCAACACC CTGCAGGCCA ATGGCGAACT GAACGCCACG CACATCGACC AGATGGCCCG GCAGATTGCC GATTTTCACC TTCAGGCTCC GCGTGTGCCG ATGGAGCACC CGCTGGGCAC GCCAGAGAGC GTGATGGCCC CGGTGGAGCA GAACTTCGAG CAAATTCGCC CATTCCTCAG CGACAAAGCC GATCTGCAGC AACTTGACGC CCTGCAGGCC TGGGCCCGCA GCAGCTTCGA GCGCCTGCAA GGGCTGCTGG AAAAGCGCAA GGCCAATGGC TTCATCCGTG AGTGCCACGG TGACATTCAC CTGGGCAACG CCACCTTGAT CGATGGCAAG GTGGTTATCT TCGATTGCAT CGAATTCAAC GAGCCTTTCC GACTGACCGA CGTCTACGCC GACACCGCCT TCCTGGCCAT GGACCTGGAA GACCGTGGCC TGAAGTGCCT GGCCCGACGC TTCATCAGCC AGTACCTGGA ACTGACAGGG GACTACGAAG GCCTGGAACT GCTCAACTTC TACAAAGCCT ACCGCGCGCT GGTGCGGGCC AAGGTCGCAC TGTTCAGCAT GCCGGCCGAC GCCGATGGCG TGCAACGTGC CACCACCCTG CGCACCTACC GCAACTACGC CAACCTGGCC GAAAGTTACA GCGCCATCCC GTCGCGCCTG CTGGCCATCA CCCATGGTGT TTCGGCGGTG GGGAAAAGTC ACGTGGCCAT GCGCCTGGTC GAGGCCTTGG GTGCAGTGCG CGTGCGTTCG GACGTAGAGC GCAAGCGCCT GTTCGGCGAA CAACAGCAGG CCGACGCCGG CCAACTGAGC ACAGGCATCT ATGACCAGGA CGCCAGCGCT GCGACCTATC TGCGCCTGCA CGAGATAGCT GCGACCGTGC TGCGCGCCGG CTTCCCGGTG GTGCTGGACG CCACCTACCT CAAGCGTGAA CAACGCCAGG CTGCGGCAGA GGTTGCCAGC CAGACCGGCG TGCCGTTCCT CATCCTCGAC TGCCACGCGC CAGAGGCGGT CATCGCCAGT TGGCTGGAGC AGCGCCAGGC TGAAAACAGC GACCCCTCGG ATGCCACGCT GGAGGTGATC AAGGCCCAGC AGGCCAGCCG TGAGGCGCTG GATGCGCAGG AGCTGGTGCA CAGCACCCGC GTCGATACCC AGGCTGCCGG CAGCATGGAT CAAGTGATCG AGCAGATTCG CCAGCGGTTG CCTGGCCTGT AA
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Protein sequence | MAHSNSLAPE GFAVSQALIT ALQNPALYPH PVEGFQLIET HISWVLLTGE YAYKIKKPMN FGFLDFTGLD QRQHFCNEEL RLNQRLTEGL YLEVLPITGS VDAPQIGGEG VAIEYALKMR QFPQGQMLNT LQANGELNAT HIDQMARQIA DFHLQAPRVP MEHPLGTPES VMAPVEQNFE QIRPFLSDKA DLQQLDALQA WARSSFERLQ GLLEKRKANG FIRECHGDIH LGNATLIDGK VVIFDCIEFN EPFRLTDVYA DTAFLAMDLE DRGLKCLARR FISQYLELTG DYEGLELLNF YKAYRALVRA KVALFSMPAD ADGVQRATTL RTYRNYANLA ESYSAIPSRL LAITHGVSAV GKSHVAMRLV EALGAVRVRS DVERKRLFGE QQQADAGQLS TGIYDQDASA ATYLRLHEIA ATVLRAGFPV VLDATYLKRE QRQAAAEVAS QTGVPFLILD CHAPEAVIAS WLEQRQAENS DPSDATLEVI KAQQASREAL DAQELVHSTR VDTQAAGSMD QVIEQIRQRL PGL
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