Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4545 |
Symbol | |
ID | 5194523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5083541 |
End bp | 5083873 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640589025 |
Product | hypothetical protein |
Protein accession | YP_001269849 |
Protein GI | 148549747 |
COG category | [S] Function unknown |
COG ID | [COG3098] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0882474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000435036 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCGAGC AACGCGTGCT GGATATTGCC GACCACCTGC TCTTGATCGA GCGTGAGCTG CAGGTGCAAG GCTGGTGGGA TGACGAGCCG CCAAGCGACG AGGCACTGGC CAGTACGGTG CCGTTCGCCG TGGATACCCT CAGTTTTGAG CAGTGGCTGC AATGGATCTT CCTGCCACGC ATGAAGATCA TCATCGAGCT GGGCCACCCG CTGCCCAACG CATCGAGCAT CCTTGTCATG GCCGAAACCG TGTTTACCGA CCGGCCGGAG CAAAGTCGTG AGCTACGCCG CCTGTTGGCA GCTTTTGACC AATTGATCGC TCCTTCCGCC TGA
|
Protein sequence | MIEQRVLDIA DHLLLIEREL QVQGWWDDEP PSDEALASTV PFAVDTLSFE QWLQWIFLPR MKIIIELGHP LPNASSILVM AETVFTDRPE QSRELRRLLA AFDQLIAPSA
|
| |