Gene Pput_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4545 
Symbol 
ID5194523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5083541 
End bp5083873 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content59% 
IMG OID640589025 
Producthypothetical protein 
Protein accessionYP_001269849 
Protein GI148549747 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0882474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000435036 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAGC AACGCGTGCT GGATATTGCC GACCACCTGC TCTTGATCGA GCGTGAGCTG 
CAGGTGCAAG GCTGGTGGGA TGACGAGCCG CCAAGCGACG AGGCACTGGC CAGTACGGTG
CCGTTCGCCG TGGATACCCT CAGTTTTGAG CAGTGGCTGC AATGGATCTT CCTGCCACGC
ATGAAGATCA TCATCGAGCT GGGCCACCCG CTGCCCAACG CATCGAGCAT CCTTGTCATG
GCCGAAACCG TGTTTACCGA CCGGCCGGAG CAAAGTCGTG AGCTACGCCG CCTGTTGGCA
GCTTTTGACC AATTGATCGC TCCTTCCGCC TGA
 
Protein sequence
MIEQRVLDIA DHLLLIEREL QVQGWWDDEP PSDEALASTV PFAVDTLSFE QWLQWIFLPR 
MKIIIELGHP LPNASSILVM AETVFTDRPE QSRELRRLLA AFDQLIAPSA