| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4544 |
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| Symbol | |
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| ID | 5194522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5081408 |
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| End bp | 5083132 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589024 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001269848 |
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| Protein GI | 148549746 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.145283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000405432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAGCTTT TATCTGGCGC TGAGATGGTC GTCCGCTTTT TGCGTGACGA AGGCGTTAAG
CACATCTACG GGTACCCTGG TGGTGCTCTC CTGCATGTTT ACGACGCTTT GTTCAAAGAA
CCGGAAGTGG AACACATCCT GGTTCGTCAC GAGCAGGCGG CCACCCATAT GGCGGACGGC
TACGCTCGCG CCACCGGCAA GGCCGGTGTG GTGCTGGTAA CCTCCGGTCC TGGCGCGACC
AATGCCATTA CCGGTATTGC CACCGCCTAC ATGGACTCGA TTCCGATGGT CATCCTGTCC
GGCCAGGTGC CTAGCACCAT GGTGGGCACC GATGCCTTCC AGGAAACTGA CATGATCGGT
ATCTCGCGGC CGATCGTGAA GCACAGCTTC ATGATCAAGA ATCCGACCGA GATCCCTGAA
GTTCTGAAAA AAGCTTTCTA CCTGGCGCAA TCCGGTCGTC CAGGTCCAGT CGTGGTCGAC
ATTCCAAAAG ATATGACCAA CCCGGCTGAG AAGTTCGAAT ACGTCTACCC GAAAAAGGTC
AAGCTGCGCT CCTACAGCCC GGCGGTCCGC GGTCACTCCG GCCAGATCCG CAAGGCTGCC
GAGATGCTTC TGGCGGCCAA GCGCCCGGTC GTCTACTCCG GTGGCGGTGT GATCCTCGGC
GGTGGCTCCG AAGCCCTGAC TGAAATTGCC AAGTCGCTGA ACCTGCCGGT CACCAATACC
CTGATGGGGT TGGGTGGCTT CCCGGGTACC GACCGCCAGT TCCTCGGCAT GCTTGGCATG
CATGGCAGCT ACACCGCCAA CATGGCCATG CACAATGCCG ACGTCATTTT TGCCGTCGGT
GCGCGTTTCG ACGACCGCGT TGTAAACGGT CCGGCCAAGT TCTGCCCGAA CGCCAAGATC
ATCCACATCG ACATCGACCC GGCGTCTATC TCGAAGATGA TCAAGGCCGA CGTGCCAATC
GTCGGCCCGG TCGACAGCGT GCTCAGCGAA ATGCTCGGCA TCCTCAAGGA AATCGGCGAG
CAGCCTGACA AGGCTTCGCT GGATGCCTGG TGGAAGCAGA TTGACGAATG GCGTGGCAAT
GGCGAGTTGT TCCCTTACGA CAAGGGCGAT GGCAACGTCA TCAAACCGCA AAAAGTCATC
GAGACACTGT GCGAAGTGAC CAATGGCGAT GCCTTCGTCA CTTCCGACGT GGGCCAGCAT
CAGATGTTTG CCGCGCAGTA CTACCGCTTC AACAAGCCAA ACCGCTGGAT CAACTCCGGT
GGCCTGGGCA CCATGGGCTT CGGCTTCCCG GCGGCGATGG GCGTCAAGCT CAACTTCCCG
GATCAGGACG TGGCCTGTGT GACCGGCGAA GGCAGCATCC AGATGAACAT CCAGGAGCTG
TCTACCTGCA TGCAATACGG CCTGCCGGTG AAGATCGTCA ACCTCAACAA CGGTGTGTTG
GGCATGGTCC GTCAATGGCA GGACATGGCC TACAACGGTC GTCACTCGCA CTCGTACGTC
GAGTCGCTGC CTGACTTCAT CAAGCTGGCT GAGGCCTATG GCCATGTGGG TATCCGCATC
ACCAGCCTGA AGGACCTCAA GCCGAAGCTG GAAGAAGCGT TTGCGATGAA GGACCGTCTG
GTGTTCATCG ACATCGCGGT TGACCGCAGT GAGCACGTCT ATCCGATGCA GATCAAGGAT
GGCTCGATGC GTGACATGTG GCTGAGCAAG ACGGAGCGTA CCTGA
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| Protein sequence | MELLSGAEMV VRFLRDEGVK HIYGYPGGAL LHVYDALFKE PEVEHILVRH EQAATHMADG
YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVILS GQVPSTMVGT DAFQETDMIG
ISRPIVKHSF MIKNPTEIPE VLKKAFYLAQ SGRPGPVVVD IPKDMTNPAE KFEYVYPKKV
KLRSYSPAVR GHSGQIRKAA EMLLAAKRPV VYSGGGVILG GGSEALTEIA KSLNLPVTNT
LMGLGGFPGT DRQFLGMLGM HGSYTANMAM HNADVIFAVG ARFDDRVVNG PAKFCPNAKI
IHIDIDPASI SKMIKADVPI VGPVDSVLSE MLGILKEIGE QPDKASLDAW WKQIDEWRGN
GELFPYDKGD GNVIKPQKVI ETLCEVTNGD AFVTSDVGQH QMFAAQYYRF NKPNRWINSG
GLGTMGFGFP AAMGVKLNFP DQDVACVTGE GSIQMNIQEL STCMQYGLPV KIVNLNNGVL
GMVRQWQDMA YNGRHSHSYV ESLPDFIKLA EAYGHVGIRI TSLKDLKPKL EEAFAMKDRL
VFIDIAVDRS EHVYPMQIKD GSMRDMWLSK TERT
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