| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4540 |
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| Symbol | |
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| ID | 5195237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5077747 |
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| End bp | 5078760 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589020 |
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| Product | putative sulfite oxidase subunit YedY |
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| Protein accession | YP_001269844 |
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| Protein GI | 148549742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000750768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0010274 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTATCA AGCTTCCCAG GTCTTCCGAG TGCAAGGCGT CGGAGATCAC CCCCGAAGGC
ATTTACCTTT CCCGTCGTAC CCTGCTGGGT AGCTCATTGG CTGGCTTGGC GCTAGGCGCA
TTGCCGGGCT GGGTGGGCGC GGCGCAAGGG TCGCGTTATG CCGATGTGCA GGCTGGAGCC
GCGCCGGCCT GGTTCACTGA CAAGCTCGCG GCCACGCGCT GGCAAGCGGT GACGGTGAAG
GACGAGGCGA TTACGCCGTT CAAGGATGCC ACTCACTACA ACAACTTCTA CGAGTTCGGG
CCCGACAAGG GCGACCCGGC GGCCAATGGC GACAGCCTGA AGACCGAACC GTGGTCCATT
GTGGTGGATG GTGAAGTGGG CAAGCCCGGA CGCTATGCAC TGGAGGACTT CGTCAAACCC
TATCAGCTTG AGGAGCGGAT CTATCGGCTG CGCTGCGTAG AGGCGTGGTC GATGGTCATT
CCGTGGCTGG GGTTCCCTTT GGCTCAGGTG CTCAAGCAGG TCGAGCCGAC TTCCAGTGCG
CGTTATGTGC GTTTCGAAAC GCTGAAGGAT CCGCAGCATA TGCCGGGGCA ACGTTCTGGC
TTCGCCTTGA TCGACTGGCC TTATAGAGAA GGGTTGCGCC TGGATGAGGC GATGCACCCG
CTGGCAATTC TCGCAGTGGG TATGTACGGC CGGGAACTGC CCAACCAAAA CGGTGCGCCG
TTGCGTTTGG TGGTGCCTTG GAAGTATGGC TTCAAGAGCA TCAAGTCGAT TGTGCGCATC
AGCCTGGTCG CGGAGCAGCC CGGCACTACC TGGGAAGGGC TGGCGCCGGA TGAATATGGT
TTCTATGCCA ATGTGAACCC GACAGTCGAC CACCCGCGCT GGAGCCAGGC GCGCGAACGT
CGTTTGCCCA GCGGGTTGTT CAGCCCCAAC GTGCGGGAGA CACAGATGTT CAATGGCTAT
GCCGATGAAG TGGCGTCGCT GTATACCGGG CTCGATCTGC GGAAGAACTA CTGA
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| Protein sequence | MLIKLPRSSE CKASEITPEG IYLSRRTLLG SSLAGLALGA LPGWVGAAQG SRYADVQAGA
APAWFTDKLA ATRWQAVTVK DEAITPFKDA THYNNFYEFG PDKGDPAANG DSLKTEPWSI
VVDGEVGKPG RYALEDFVKP YQLEERIYRL RCVEAWSMVI PWLGFPLAQV LKQVEPTSSA
RYVRFETLKD PQHMPGQRSG FALIDWPYRE GLRLDEAMHP LAILAVGMYG RELPNQNGAP
LRLVVPWKYG FKSIKSIVRI SLVAEQPGTT WEGLAPDEYG FYANVNPTVD HPRWSQARER
RLPSGLFSPN VRETQMFNGY ADEVASLYTG LDLRKNY
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