| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4535 |
|---|
| Symbol | |
|---|
| ID | 5191505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5060998 |
|---|
| End bp | 5061564 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640589010 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269839 |
|---|
| Protein GI | 148549737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.026025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.651544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGG CCGCAAGGCG AGTGACAAGC TGTGCGCTTT CGCTATTGCT GGCGGTCCTG
TTCCTTTCTG CAGGCGCTGC CCGGGCAGAC TCCGGCACAA CCGCCGCCCA GGCACAGCAA
CGCGCCAAGG CAGTCACCCA GGTAGTACTG GGTATCTTCA GTTACGCCCG CTGGCCCGTC
GAACCCTCTC CTTTGCGCCT GTGCCTGGTC GGCCCGACCG AGTACGCCGA CGATCTCATC
AAGGGCCATG TCCAGGAGTC CGGCCGGCCG CTGCAGGTGC GGCGCTTGCT GGCAGAAGAC
ACCCAGATCG CCCAGGCCTG CGATGCCCTG TACATTGGCA AGCTTGACCA GGGCCAGCGG
GATCGGCTGT TCCAGCGTAT CGGCGGCCAC CCGGTGCTGA GCATCAGCGA GGCGGATGAC
CCCTGCACGG TCGGCAGCCT GTTCTGCCTG CGGGTCAGCG ACCAGCAGGT GGCCTTTGAA
GTCAATCTCG ACTCGGTGGC ACGCTCTGGC GTGCGTATTC ACCCCAGCGT GCTGCAGTTG
TCGCGGCGCC GGGGGGGGCA GCCATGA
|
|---|
| Protein sequence | MNVAARRVTS CALSLLLAVL FLSAGAARAD SGTTAAQAQQ RAKAVTQVVL GIFSYARWPV
EPSPLRLCLV GPTEYADDLI KGHVQESGRP LQVRRLLAED TQIAQACDAL YIGKLDQGQR
DRLFQRIGGH PVLSISEADD PCTVGSLFCL RVSDQQVAFE VNLDSVARSG VRIHPSVLQL
SRRRGGQP
|
|---|
| |