| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4531 |
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| Symbol | |
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| ID | 5192757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5056490 |
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| End bp | 5058016 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589006 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001269835 |
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| Protein GI | 148549733 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00489729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.588082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CGCAATCCCC TAACAGCACC AAGGTCGAGC AGGTCAAGCT GCTGATCGAC
GGCCAGTGGG TCGAGTCCAA AACCACCGAA TGGCGTGACA TCGTCAACCC GGCCACCCAA
GAGGTGCTGG CGCGCGTACC GTTCGCCACC GTCGAGGAAG TCGATGCAGC CGTGGCCGCT
GCTCACCGCG CTTTCCAGAC ATGGCGTAAC ACCCCGATCG GCGCGCGCAT GCGCATCATG
CTTAAGCTGC AGGCGCTGAT CCGCGAACAC ACCAAACGCA TTGCCCAGGT GCTCAGCGCC
GAGCAGGGCA AAACCCTGGC CGACGCTGAA GGCGATATCT TCCGCGGCCT GGAAGTGGTC
GAGCACGCGG CGTCCATTGG CACCCTGCAG ATGGGCGAAT TTGCCGAGAA CGTCGCCGGC
GGTGTTGATA CCTACACCCT GCGCCAGCCG ATCGGCGTAT GCGCTGGCAT CACCCCGTTC
AACTTCCCGG CAATGATCCC GCTGTGGATG TTCCCTATGG CCATTGTCTG CGGCAACACG
TTCGTGCTCA AACCGTCCGA GCAGGACCCG CTGTCGACCA TGCTACTGGT CGAGCTGGCG
CTGGAAGCCG GCGTACCGGC CGGTGTGCTG AACGTGGTGC ACGGCGGTAA GCAGGTGGTG
GATGCCATTT GCACCCACCA GGACATCAAG GCGATTTCCT TCGTGGGCTC TACTGAAGTC
GGCACGCACG TTTACAACCT TGGCAGCCAG CATGGCAAGC GTGTGCAGTC AATGATGGGC
GCCAAGAACC ACGCGGTGGT GTTGCCTGAT GCCAACCGCA CACAAACCAT CAATGCGCTG
GTGGGTGCTG CCTTCGGCGC GGCGGGCCAG CGCTGCATGG CGACCTCGGT GGCGGTGTTG
GTGGGCAAGG CCCGCGAATG GTTGCCGGAT ATCAAGGAGG CTGCCAGCAA GCTCAAGGTC
AATGCTGGCT GTGAGCCGGG CACCGACGTT GGCCCGGTGG TATCCAAGCG TGCCAAGGAA
CGTGTGCTGG GCCTGATCGA AAGCGGTATC AAGGAAGGCG CCAAGCTGGA ACTTGACGGC
CGTGACGTCA AGGTGCCGGG CTACGAGCAA GGCAACTTCG TCGGCCCAAC CCTGTTCTCG
GGCGTGAAGA CCGACATGCA GGTGTATACC CAGGAAATCT TCGGCCCGGT GCTGGTGACC
CTGGAAGTCG ATACGCTCGA CGAGGCCATC GCCCTGGTCA ACGCCAACCC GTTCGGCAAC
GGCACCGGCC TGTTCACCCA GAGCGGCGCT GCGGCCCGCA AGTTCCAGAG CGAAATCGAT
ATTGGCCAGG TCGGCATCAA CATCCCGATC CCGGTACCCG TACCGTTCTT CAGCTTCACC
GGCTCGCGGG GTTCCAAACT CGGTGACCTC GGGCCGTACG GCAAGCAAGT GGTGCAGTTC
TACACTCAGA CCAAGACCGT CACTGCTCGC TGGTTCGATG ACGACAGCGT CAACGACGGT
GTGAACACCA CCATTAGCCT GCGCTAA
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| Protein sequence | MNAPQSPNST KVEQVKLLID GQWVESKTTE WRDIVNPATQ EVLARVPFAT VEEVDAAVAA
AHRAFQTWRN TPIGARMRIM LKLQALIREH TKRIAQVLSA EQGKTLADAE GDIFRGLEVV
EHAASIGTLQ MGEFAENVAG GVDTYTLRQP IGVCAGITPF NFPAMIPLWM FPMAIVCGNT
FVLKPSEQDP LSTMLLVELA LEAGVPAGVL NVVHGGKQVV DAICTHQDIK AISFVGSTEV
GTHVYNLGSQ HGKRVQSMMG AKNHAVVLPD ANRTQTINAL VGAAFGAAGQ RCMATSVAVL
VGKAREWLPD IKEAASKLKV NAGCEPGTDV GPVVSKRAKE RVLGLIESGI KEGAKLELDG
RDVKVPGYEQ GNFVGPTLFS GVKTDMQVYT QEIFGPVLVT LEVDTLDEAI ALVNANPFGN
GTGLFTQSGA AARKFQSEID IGQVGINIPI PVPVPFFSFT GSRGSKLGDL GPYGKQVVQF
YTQTKTVTAR WFDDDSVNDG VNTTISLR
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