Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4529 |
Symbol | |
ID | 5191721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5055055 |
End bp | 5055399 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640589004 |
Product | protein of unknown function DUF861, cupin_3 |
Protein accession | YP_001269833 |
Protein GI | 148549731 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.241247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.339292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT TCATCACCGT CCTGCGCGAA ACCTGCCCGA CGCCGGTCGT GGACGCCACC AAGTGGAAGC GCATCGGCGG CGATCCGCAC ACCGTCAACC TCAATGCCTA CCTGTCGGCC GACGGCAGCA AGATCATGGG CACCTGGATC TGCACCCCGG GCAAGTTCGA GGTCAACTAC GATAAATGGG AGTTCTGCCA CTTCCTCGAT GGCTATTGCA TCATCACCCC GGAAGGCGAA GAACCGAAAC ACCTGAAAGC AGGTGATGTG TTCGTGATCG AGCCAGGCAT GAAAGGTACC TGGGAAGTGG TCGAGACTGT ACGTAAGTAT TTCGTCTTCG CCTAA
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Protein sequence | MSDFITVLRE TCPTPVVDAT KWKRIGGDPH TVNLNAYLSA DGSKIMGTWI CTPGKFEVNY DKWEFCHFLD GYCIITPEGE EPKHLKAGDV FVIEPGMKGT WEVVETVRKY FVFA
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