Gene Pput_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4529 
Symbol 
ID5191721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5055055 
End bp5055399 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID640589004 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_001269833 
Protein GI148549731 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.241247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.339292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT TCATCACCGT CCTGCGCGAA ACCTGCCCGA CGCCGGTCGT GGACGCCACC 
AAGTGGAAGC GCATCGGCGG CGATCCGCAC ACCGTCAACC TCAATGCCTA CCTGTCGGCC
GACGGCAGCA AGATCATGGG CACCTGGATC TGCACCCCGG GCAAGTTCGA GGTCAACTAC
GATAAATGGG AGTTCTGCCA CTTCCTCGAT GGCTATTGCA TCATCACCCC GGAAGGCGAA
GAACCGAAAC ACCTGAAAGC AGGTGATGTG TTCGTGATCG AGCCAGGCAT GAAAGGTACC
TGGGAAGTGG TCGAGACTGT ACGTAAGTAT TTCGTCTTCG CCTAA
 
Protein sequence
MSDFITVLRE TCPTPVVDAT KWKRIGGDPH TVNLNAYLSA DGSKIMGTWI CTPGKFEVNY 
DKWEFCHFLD GYCIITPEGE EPKHLKAGDV FVIEPGMKGT WEVVETVRKY FVFA