Gene Pput_4507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4507 
SymbolmscL 
ID5190699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5032589 
End bp5033008 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID640588982 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_001269811 
Protein GI148549709 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC TCAACGAGTT CAAGGCTTTC GCAGTCAAAG GCAATGTCGT CGACATGGCG 
GTCGGTATCA TCATCGGCGC GGCCTTCGGC AAGATCGTCT CGTCCTTCGT CGGCGACGTG
ATCATGCCGC CACTGGGCCT GCTGATCGGC GGCGTGGACT TCAGCGACCT GGCCATTACC
CTGAAGGCTG CCGAAGGTGA CGTACCAGCG GTGGTGCTGG CGTATGGCAA GTTCATCCAG
ACCGTGATCG ACTTCGTGAT CGTGGCCTTT GCCATCTTCA TGGGCGTGAA GGCGATCAAC
AAGCTCAAAC GTGAAGAAGC CGTGGCGCCG ACTACGCCGC CTGTGCCTTC GGCTGAAGAG
ACGCTGCTGA CCGAAATCCG CGATTTGCTC AAGACGCAGA ACCAGAACCG CTTGCCCTGA
 
Protein sequence
MGVLNEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPLGLLIG GVDFSDLAIT 
LKAAEGDVPA VVLAYGKFIQ TVIDFVIVAF AIFMGVKAIN KLKREEAVAP TTPPVPSAEE
TLLTEIRDLL KTQNQNRLP