| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4504 |
|---|
| Symbol | |
|---|
| ID | 5192194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5028863 |
|---|
| End bp | 5029225 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640588979 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_001269808 |
|---|
| Protein GI | 148549706 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.833775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.872973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC ATGACGAACG CCGCCGCTTT CAACGCATCG ACTTCGATGC CCCCATCGAG
CTGCGCCAGG GGCTGAAACG CTGGCCTGCA AAACTGCTGG ACCTTTCACT CAAAGGCTTG
CTGATCGAAC GCCCCGCAGG CTGGGATGCC GACCTGACTC AGGACTTCGA CGCCATCATC
GAGCTGAACG AGGATGCCCG TGTGCAGATG CAGGTCGAAC TGCGCCACGA AGAACCGGAC
CGCCTGGGCT TCATCTGCCT GTACATCGAC CTCGACTCGA TGAGCCATTT GCACCGTCTT
GTGGAATTGA ACGTGGCTGA CAGCACCGAA ATGATGCGTG AGCTGCGTGA ACTCATCGAA
TAA
|
|---|
| Protein sequence | MSDHDERRRF QRIDFDAPIE LRQGLKRWPA KLLDLSLKGL LIERPAGWDA DLTQDFDAII
ELNEDARVQM QVELRHEEPD RLGFICLYID LDSMSHLHRL VELNVADSTE MMRELRELIE
|
|---|
| |