| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4493 |
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| Symbol | |
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| ID | 5190940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5017544 |
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| End bp | 5018281 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588968 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001269797 |
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| Protein GI | 148549695 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.539023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTG GCAACCAAAG GACAGACAAG TTGACCACCC CGAACATGAA CAGCCCCATT
CTCGTTACCG GAGCCAGCCA GCGTGTCGGG CTGGCCCTGG CCCTCGAACT GGCACAGGCC
GGCCATACGG TGGTCAGTGC CAGCCGCAGC ATCCTGCCCC AGGCAGCCCA CCCCAACATC
GTGCAGTTTC AGGCCGACCT GTGCCAGGCG GACGACCGCC AGGCGCTGAT CGATCACCTG
CACGATCGTT ACGACGGACT GCGCGCCATC ATCCACAACG CCTCGCTATG GCTCGACGAC
GGCCTCGACA ACCTCGAGAC CATGTTCCGC CTGCACGTCG AAGCGCCCTA CCACCTCAAC
CTGGCCCTGG GCGACCTGCT GGCCAAGGTG GAAAAGGCCG ACATCATTCA CATCTGCGAC
GAAACCTCTT CGCGCGGCAG TAAAAGCCAC ATCGGCTACG CCGCCACCAA GGCCGCACTG
CAGAACATGG TGCTGTCATT TGCTGAAAAA TATGCGCCCA AGGTGCGTGT GAACGGTATC
CTGCCCGGGC TGCTGATCCT CAAGGAAGGG GGTGACGAAG CCTACCGCCA GCAAACCCTG
AAAAAGGCCC TGCTGGAATT CGAACCCGGC GCCGGCCCGC TGATCGAGAC CGTCAAGTAC
CTGCTCGCCA GCCAGTACAG CACCGGCAGC CAGGTGGTCA TCAACGGTGG CCGCCACCTG
AAGAACCGCA TGACTTGA
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| Protein sequence | MLGGNQRTDK LTTPNMNSPI LVTGASQRVG LALALELAQA GHTVVSASRS ILPQAAHPNI
VQFQADLCQA DDRQALIDHL HDRYDGLRAI IHNASLWLDD GLDNLETMFR LHVEAPYHLN
LALGDLLAKV EKADIIHICD ETSSRGSKSH IGYAATKAAL QNMVLSFAEK YAPKVRVNGI
LPGLLILKEG GDEAYRQQTL KKALLEFEPG AGPLIETVKY LLASQYSTGS QVVINGGRHL
KNRMT
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