Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4491 |
Symbol | |
ID | 5190488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5015794 |
End bp | 5016729 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588966 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001269795 |
Protein GI | 148549693 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.51698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC AGGGACGTAA ACCGCTGATC GATGCGAGTT TCGAACAGCA GGAGCTGTTT CCGATTCGTG AAGTGTCACG CTTGACCGGT GTCAACGCCG TGACCCTTCG CGCCTGGGAA CGCCGTTATG GGCTGATCCA GCCCATCCGT ACCGACAGTG GTCACCGCCT GTATTCCCAG GCTGATATCG ATGAAATCCG CCGTATCCTC GGCTGGCTGG AGCGCGGTGT GGCGGTCAGC AAGGTGGGCA GCATTCTCGC TCGCGGCCAT GCCCTCTCCG GGCAGGCTGA CGGCGCAGTG GACCCCTGCT TGCGCTGGCA AAACCAGATT CGCCTGGCGG TACAGCACTT CGACGTGGCG GGCCTGGATC GCCTTTATGA CGAGGTGTTC GCGGCCAGCA CCCTGGACCA GGTTTTCGCC AATGTGTTCA TGCCGGTGTG GCATGACATG GTAGTCCGGC AAGGCGGCTA CGGGCAGGCC AGCGAATGGC TGTTCTATGA TCAGTTCCTG CGCGGTCGGG TTTTCGCCCG CTTGCAGCTG GCCCGTGTGC CGAGTAGCCG CACCGTGCTG GTGGCGCCAT TGCCGGGGCA GTGCCATGAG CTTGAGTTAC TGGTAACCAG TCTGATCCTG GGTAGCGATG AAACACGCGT GATCCCGCTG GCGAACGGGC AGCCGCTGCA AGAGCTTGCG CTGGTCTGCG AACGGCTGAA GCCGGACGCC TTGGTGCTGT TTTCCCATCC GTCGCCCACA GTAGAACTCA CCCGGCACCT CAAGCGCCTG GCGTCGATGC TGGAATGCCC GTTGTTACTG GCCGGTGAGG CGGCAGAAGC GGTACAGGAC AGCCTGGCTG GCAGCCCTGT AGCCTGCCTG GGCGCGCAGG GCAGTGTGAT GCGCCAGCGT TTGCGGCAGT TTCTGGCCCG TCAGCTCGAT ACTTGA
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Protein sequence | MNEQGRKPLI DASFEQQELF PIREVSRLTG VNAVTLRAWE RRYGLIQPIR TDSGHRLYSQ ADIDEIRRIL GWLERGVAVS KVGSILARGH ALSGQADGAV DPCLRWQNQI RLAVQHFDVA GLDRLYDEVF AASTLDQVFA NVFMPVWHDM VVRQGGYGQA SEWLFYDQFL RGRVFARLQL ARVPSSRTVL VAPLPGQCHE LELLVTSLIL GSDETRVIPL ANGQPLQELA LVCERLKPDA LVLFSHPSPT VELTRHLKRL ASMLECPLLL AGEAAEAVQD SLAGSPVACL GAQGSVMRQR LRQFLARQLD T
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