| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4487 |
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| Symbol | |
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| ID | 5192468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5013230 |
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| End bp | 5014111 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588962 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001269791 |
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| Protein GI | 148549689 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCA AACAACTGCG CAGCTTTATC GAAGTGGTCC ACCGCGGCGG TTTTACCCAG
GCGGCACAGA CCCTGCACAT CAGCCAGTCG GCCGTGAGCA AGCAGGTGGC CCAGCTTGAG
CAAGATGTGG GCCAGCCGCT GCTGGAGCGC CAGGCGTCGC ACCTGCACCT GACCGCTGCC
GGGCGCATCG TACTGGAGCG TGGCGAAGCC CTGCTGCGCC AGCGCCAGGC GCTGCTCAAC
GAGCTGGACG ATCTCAGCCA GATGGAGCGT GGCGAACTAC GCCTGGGCTT GCCGATGCTT
GGCAGCGACA CGTTGTTCGC CGGCTTGTTC GCCGAGTACC GGCGGCGCCA TCCGAACATC
GCTATCCAGC TGCTTGAAGG CGGCAGCCGC AACGTCGAAC AGGCCGTCAG AAGTGGCGAA
CTGGAACTGG GCGGCTGCTT GACGCCCACC GACGAGGCAT TCGACTACCA GCCCTTCTGC
AACGAACCGC TGGATGCCTT GCTGCCGGCT GGCCATGCCC TGGCGGGCCT GGACGCCGTG
GGCCTGAGGC AACTGGCCGA TACACCGTTC CTGCTGTACC AGCGCAGTTT CGTGCTCAAC
GATCGGCTGC TCAAGGCGTG CCAGCAGCAG GGCTTCACCC CCAAGGAAGG CGGGCGCAGC
GGCCAGGCGG ATTTTTTGGC AGCGCTGGTG GCAGCGGGCC AGGGCGTGGT GATGCTGCCC
CGGGTGGTGG CAAAAGCGCT GGAGCGCCCC GGGGTGGTGC GTGTGCCGTT GAATGCGCAG
GAGGATTTAC GTTGGGATAT CGCGTTTATC TGGCGACGCG GCGCCTACCT GTCACGGGCG
GCGCAGGCGT GGTTGGCCTT GTTGCGCGAG CCCCATGGCT AA
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| Protein sequence | MEFKQLRSFI EVVHRGGFTQ AAQTLHISQS AVSKQVAQLE QDVGQPLLER QASHLHLTAA
GRIVLERGEA LLRQRQALLN ELDDLSQMER GELRLGLPML GSDTLFAGLF AEYRRRHPNI
AIQLLEGGSR NVEQAVRSGE LELGGCLTPT DEAFDYQPFC NEPLDALLPA GHALAGLDAV
GLRQLADTPF LLYQRSFVLN DRLLKACQQQ GFTPKEGGRS GQADFLAALV AAGQGVVMLP
RVVAKALERP GVVRVPLNAQ EDLRWDIAFI WRRGAYLSRA AQAWLALLRE PHG
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