| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4480 |
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| Symbol | |
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| ID | 5192388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5003898 |
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| End bp | 5005190 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588955 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001269784 |
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| Protein GI | 148549682 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.409893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA CTGCCAATGC CCGTAGTTGG GTCGAGCACG CCAACGGGCA CAGCGACTTC
CCGCTGCAGA ACCTGCCCTT GGGCATCTTC AGCCGGCCGG GTGAAGCCAG GCGCTGTGGC
GTGGCGATCG GCGACGCGAT CCTCGACCTG GAGGCGGTGC TGGCCGCCGG CCTGTTCGAC
GGGGCGGCCA AGGCCGCCGT TGAAGCCACC CGTGGCGGGG CTTTGAACGC CTTCTTCGCT
TTGGGCCGCA ATGCCCGCGT AGCCCTGCGC GAGCGTTTGC AGGTGCTGCT CGATGAGCAC
AGCGAACACC AGGCGGCCTT GAAGCCGGCG TTGTTCCCGG CCAGTGACTG CCAGCTGCAC
GTGCCGGCGC AGATCGGTGA CTACACCGAT TTCTACGTTG GCATCGAGCA TGCGAAGAAC
GTGGGCAAAC TGTTCCGCCC CGACAACCCA CTGCTGCCCA ACTACAAGTA CGTGCCGATC
GGTTATCACG GCCGCGCCTC CACCATCCGC CCGTCCGGCA CCGACGTGCG CCGGCCCAAG
GGCCAGACCC TGCCGGCCGG GCACACCGAG CCGAGCTTCG GCCCTTGCGC TCGTCTGGAC
TACGAACTGG AACTGGGTAT CTGGATTGGT CAGGGCAATG ACATGGGTCA GGCAATTCCG
GTAGGCGATG CCGCCGAGCA CGTAGCCGGC CTGTGCCTGC TCAACGATTG GTCGGCGCGC
GATATCCAGG CTTGGGAATA CCAGCCACTG GGGCCGTTCC TGTCCAAGAG CTTCATCACC
ACCATTTCGC CTTGGGTGGT CACCGCCGAA GCGTTGGAGC CGTTCCGCTG TGCTCAGCCG
GCACGCCCCG AAGGTGACCC GCAGCCGCTG TCGTACCTGC TGGACAAGCG CGACCAGGCC
AGTGGTGCAT TTGATATCGA ACTCGAAGTG CTGCTGCTGA CCGAGCGCAT GCGTGAGCAG
GGCATTGCCC CGCACCGCCT GACCCTGAGC AACACCCGCA GCATGTACTG GACCGTGGCG
CAGCTGGTGG CGCATCACAG CGTCAATGGC TGCCAACTGC AGCCAGGTGA CCTGTTCGGT
TCGGGCACGC TGTCGGGCGC TACGCCGGGA TCGTTCGGTA GCCTGCTGGA GATCACCGAA
GGCGGCAAAC TGCCGGTCGA GCTGGCCAGC GGCGAGGTGC GCAAATTCCT CGAAGACGGC
GACGAAATCA TCCTGCGTGC CCGCTGCACA CGTGACGGCG TAGCCAGCAT CGGTTTCGGT
GAATGCCGCG GTACGGTCAT CGCAGCCAAT TGA
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| Protein sequence | MNHTANARSW VEHANGHSDF PLQNLPLGIF SRPGEARRCG VAIGDAILDL EAVLAAGLFD
GAAKAAVEAT RGGALNAFFA LGRNARVALR ERLQVLLDEH SEHQAALKPA LFPASDCQLH
VPAQIGDYTD FYVGIEHAKN VGKLFRPDNP LLPNYKYVPI GYHGRASTIR PSGTDVRRPK
GQTLPAGHTE PSFGPCARLD YELELGIWIG QGNDMGQAIP VGDAAEHVAG LCLLNDWSAR
DIQAWEYQPL GPFLSKSFIT TISPWVVTAE ALEPFRCAQP ARPEGDPQPL SYLLDKRDQA
SGAFDIELEV LLLTERMREQ GIAPHRLTLS NTRSMYWTVA QLVAHHSVNG CQLQPGDLFG
SGTLSGATPG SFGSLLEITE GGKLPVELAS GEVRKFLEDG DEIILRARCT RDGVASIGFG
ECRGTVIAAN
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