| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4453 |
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| Symbol | |
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| ID | 5191295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4978188 |
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| End bp | 4979291 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588928 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001269757 |
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| Protein GI | 148549655 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0217211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.353022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTGGC TTGAGCCCTG GATGATTTCG AGAACCATTG AAATGACCAA CAACCGCAAA
ACCCTTTTCA TCGGCTCGGT GCTGGCCGTG GCCGTCCTGG CCGGCATCGT CGGCCCCTGG
ATCTTTGGCA GTGACCACCG CCAGAGTACC AATGACGCCT ATGTGAGCGC CGACTACACC
GTGGTCGCGC CCAAAGTCGC CGGTTTCATC AAGCAAGTGC TGGTGGAAGA CAATCAGCAG
GTCACGGCTG GCCAGTTGCT GGCGACCATC GATGCGCGTG ACTACCAGGC TGCGCTGGAT
GCTGCGCAGG CGCAGTTGCT GGTAGCCCAG GCACAAAGTG CCGATGCCCG CGCCACGCTT
GAACGCCAGG ACGCGCTGAT TGCCCAGGCC GAAGCGGCAG TGAAGGCGGC TCAGGCTGAA
GCGGCGTTCG CCGACCATGA AGTCAACCGC TACAGCCGCC TTGCCGAGCA GGGCGCGGGT
ACCGTGCAGA ACGCACAGCA GGCGCGCAGC GCTGTCGATC AAGCCCGTGC TCGCCTGGCC
AACGCTCAAG CTGCGCGGGT GGCGGCGCGC AAGCAGGTAG ACATCCTCAC GGCTCAAGTG
GCCAGCGCCG ATGGCCAGCT CAAGCGTGCC GAAGCAGGCC TGGAAAAGGC CCAGCTCGAT
CTGTCCTACA CCCGCATCAC AGCGCCGGTG GACGGTATGG TCGGCGAACG CGCCCTGCGC
GTGGGGGCCT ACGTCAACCC GGGCGCCCGC CTGTTGTCGG TGGTGCCGTT GCAGCAGGCT
TATGTGGTCG GCAACTTCCA GGAAACCCAG CTGACCCACG TACAGCCGGG CCAGCCGGTG
CGCATCAGCG TCGACACCTT CTCCGGCGAA ACCCTGCAAG GCCATGTGCA AAGCATTGCC
CCGGCTACCG GCGTAACCTT TGCTGCGGTC AAGCCAGACA ACGCCACCGG CAACTTCACC
AAGGTGGTGC AACGCATTCC GGTAAAGATC GTCTTCGATG ACGGCCAGCC ACTGCTCACC
CGCCTGCGTG TGGGCATGTC GGTAGAAGCC ACCATCGACA CGCGTGGCGA CAAGCTGGAC
GGCAAAGAGG TAAGCGCGCG ATGA
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| Protein sequence | MRWLEPWMIS RTIEMTNNRK TLFIGSVLAV AVLAGIVGPW IFGSDHRQST NDAYVSADYT
VVAPKVAGFI KQVLVEDNQQ VTAGQLLATI DARDYQAALD AAQAQLLVAQ AQSADARATL
ERQDALIAQA EAAVKAAQAE AAFADHEVNR YSRLAEQGAG TVQNAQQARS AVDQARARLA
NAQAARVAAR KQVDILTAQV ASADGQLKRA EAGLEKAQLD LSYTRITAPV DGMVGERALR
VGAYVNPGAR LLSVVPLQQA YVVGNFQETQ LTHVQPGQPV RISVDTFSGE TLQGHVQSIA
PATGVTFAAV KPDNATGNFT KVVQRIPVKI VFDDGQPLLT RLRVGMSVEA TIDTRGDKLD
GKEVSAR
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