| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4451 |
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| Symbol | |
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| ID | 5192326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4975676 |
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| End bp | 4976488 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588926 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001269755 |
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| Protein GI | 148549653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.358799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG TCCTGATCAC CGGTTGTTCC AGCGGCATCG GCCGCGCCCT GGCCGACGCC
TTCCGCGATG CGGGCCACCA TGTCTGGGCC ACCGCCCGCA AGCCTGAGGA TGTCGAGCAA
CTGAGTGCCG CCGGCTACAC GGCCCGGCAG CTGGATGTAA ACGACGGCGA GGCACTGGCC
CGCCTGGCAG AGGAACTGCA AACCCTCGAT ATCCTGATCA ACAACGCGGG TTACGGCGCC
ATGGGCCCAC TGCTCGATGG TGGCGTCGAC GCCCTGCGCC AGCAGTTCGA AACCAACGTC
TTCGCCGTGG TCGGCGTTAC CCGGGCGCTG TTCCCTTTGC TACGCCGCTC ACGCGGCCTG
GTGGTGAATA TCGGCAGTGT ATCGGGCGTG CTGGTCACGC CATTCGCCGG CGCGTACTGC
GCCTCGAAGG CGGCTGTGCA TGCCCTGAGC GATGCCTTGC GCCTGGAGTT GGCGCCGTTC
GGTGTGCAGG TGATGGAAGT ACAGCCGGGT GCAATTGCCT CGCAGTTCGC CAGCAATGCC
CAGCGCCAGG CTGAGCAGGT GCTGGCGGTC GACTCGGCGT GGTGGCCTTT GCGTGAGCAT
GTGCAGGCGC GGGCGCGGGC ATCGCAGGAC AAGCCAACGT CGGCGGCGGT ATTTGCCCAA
GGCGTGCTGG CAGCAGTCGG CAAGTCGCCG GCGCCCGCAG TGGTACGTTT GGGGAATGGC
AGTACAGCCT TGCCGCTGAT GGCACGGTTG CTGCCGCGGC GGTTGCTGAA CTGGGCGCTG
CGCAAGCGCT TTGGCCTGCT GCGCCCGCTC TGA
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| Protein sequence | MPTVLITGCS SGIGRALADA FRDAGHHVWA TARKPEDVEQ LSAAGYTARQ LDVNDGEALA
RLAEELQTLD ILINNAGYGA MGPLLDGGVD ALRQQFETNV FAVVGVTRAL FPLLRRSRGL
VVNIGSVSGV LVTPFAGAYC ASKAAVHALS DALRLELAPF GVQVMEVQPG AIASQFASNA
QRQAEQVLAV DSAWWPLREH VQARARASQD KPTSAAVFAQ GVLAAVGKSP APAVVRLGNG
STALPLMARL LPRRLLNWAL RKRFGLLRPL
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