| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4448 |
|---|
| Symbol | |
|---|
| ID | 5192507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4972971 |
|---|
| End bp | 4974428 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640588923 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_001269752 |
|---|
| Protein GI | 148549650 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.283136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCC CGGTAATTCT TTCTGGTGGT AGCGGTTCCC GTCTTTGGCC TCTGTCGCGC
AAGCAGTTCC CCAAACAGTT CCTGGCCCTG ACCGGTGAAC ATACACTGTT CCAGCAAACC
ATCGAGCGCC TGGTATTCGA GGGCATGGAC ACCCCGATCG TGGTCTGTAA CAAGGACCAC
AAGTTCATCG TCCAGGAGCA ACTGGCCGCA CTGAAGCTGG AAACCCAGGG CATCCTCATG
GAACCGTTCG GCCGCAACAC CGCGCCGGCC GTGGCCATGG CTGCCATGAA GCTGGTCAAC
GAAGGCCGAG ACGAGCTGAT GCTGGTGCTG CCTGCCGATC ATGTGATCGA TGACCAGAAA
GCCCTGCAAC GTGCCTTGGC CTTGGCCACC GTGGCCGCCG AGCGTGGCGA AATGGTGCTG
TTCGGCGTGC CGGCGACCAA GCCTGAAACC GGCTACGGCT ACATCCGTTC CAGCCAGGAT
GCGCTGCTGC CCGAAGGCGT GGCGCGGGTT GCACAGTTCG TCGAGAAGCC CGACGAAAAA
CGCGCGGCCG AGTTCGTCCA GGCCGGTGGT TACTTCTGGA ACAGCGGTAT GTTCCTGTTC
CGCGCCAGCC GCTTCCTCGA AGAGCTGAAA AAGCACGACG GCGACATCTA CGATACCTGC
GTACTGGCCC TGGAGCGCAG CCAGGAAGAC GGCGATGTGC TGAGCATCGA CGAAGCCACC
TTCGCCTGCT GCCCGGACAA CTCCATTGAC TATGCGGTGA TGGAGAAAAC CCAGCGTGCC
TGCGTGGTGC CGATGTCGGC CGGCTGGAGC GATGTAGGCT GCTGGTCGTC GCTGTGGGAA
GTGCACGAGA AAGACGACAA CGGCAACGTC ACCAAGGGCG ACGTGGTGGT TCAAGACAGC
CGCAACTGCA TGATCCACGG CAACGGCAAA CTGGTGTCGG TGATCGGCCT GGAGAACATC
GTGGTGGTCG AGACCAAGGA TGCCATGATG ATTGCCCACA AGGACAAGGT CCAGGGCGTC
AAGCAGATGG TCAAGACCCT CGACGAACAG GGCCGCACGG AAACCCAGAA CCACCTGGAA
GTGTATCGCC CGTGGGGCTC GTACGACTCG GTGGACATGG GCGGCCGCTT CCAGGTCAAG
CACATCACCG TCAAGCCGGG CGCCAGCCTG TCGCTGCAGA TGCACCATCA CCGCGCCGAG
CACTGGATCG TGGTATCCGG TACCGCCGAG GTGACCTGCG ACGAGAACGT GTTCTTGCTG
ACCGAAAACC AGTCGACCTA TATCCCCATC GCTTCGGTGC ACCGTTTGCG CAACCCGGGC
AAGATCCCGC TGGAGATCAT CGAAGTGCAG TCCGGCAGCT ACCTGGGCGA GGATGACATC
GAGCGCTTCG AGGATGTGTA TGGGCGCACG TCCACACCCA TCGAGCGCGG CGTTTCGGTG
AAGACCATCG CGCAGTAA
|
|---|
| Protein sequence | MMIPVILSGG SGSRLWPLSR KQFPKQFLAL TGEHTLFQQT IERLVFEGMD TPIVVCNKDH
KFIVQEQLAA LKLETQGILM EPFGRNTAPA VAMAAMKLVN EGRDELMLVL PADHVIDDQK
ALQRALALAT VAAERGEMVL FGVPATKPET GYGYIRSSQD ALLPEGVARV AQFVEKPDEK
RAAEFVQAGG YFWNSGMFLF RASRFLEELK KHDGDIYDTC VLALERSQED GDVLSIDEAT
FACCPDNSID YAVMEKTQRA CVVPMSAGWS DVGCWSSLWE VHEKDDNGNV TKGDVVVQDS
RNCMIHGNGK LVSVIGLENI VVVETKDAMM IAHKDKVQGV KQMVKTLDEQ GRTETQNHLE
VYRPWGSYDS VDMGGRFQVK HITVKPGASL SLQMHHHRAE HWIVVSGTAE VTCDENVFLL
TENQSTYIPI ASVHRLRNPG KIPLEIIEVQ SGSYLGEDDI ERFEDVYGRT STPIERGVSV
KTIAQ
|
|---|
| |