| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4440 |
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| Symbol | |
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| ID | 5195147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4962390 |
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| End bp | 4963823 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588915 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001269744 |
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| Protein GI | 148549642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.736326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.553998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCTG ATACCTACAA GGTCCGCGTG AACCTGGGAT TGTGTGCACT GGCCGCCGCC
ATCACCCTGG CCGGCTGTGC CGGCCTGCCC GACCAGCGCC TGGCCAACGA GGCCATGAAG
CGCGGTGACA CGGCATTGGC CGAGCGCAAC TACAAGGCGC TGGCCGACCT GGGCTACAGC
GAAGCGCAAG TCGGCCTTGC GGACATCAAG GTGGCCACCC GCGACCCCTC GCAAATCAGG
GAAGCCGAAG CCACCTATCG CGCTGCAGCC GCCACGTCGC CACGCGCCCA GGCGCGCCTT
GGCCGCCTGC TGGTGGCCAA GCCGGACAGC ACCCAGGCCG AGCGCGAAGA AGCAGAGACC
CTGCTCAAGC AAGCGGCCAG TCAAGGCGAA AGCAACACCT TGATCCCACT GGCGATGCTC
TACCTCAGCT ACCCGCAGAG CTTCCCCAAG GTCAACGCGC AGCAGCAGAT CGACCAGTGG
CGCGCCGCCG GCAACCCGGA AGCGGGCCTG GCCCAGGTGC TGCTGTACCG CACCCAGGGC
ACCTATGACC AGCACCTGGG CGAAGTGGAA AAGATCTGCA AGGCGGCGCT GAACACCACC
GACATCTGCT ACGTCGAACT GGCCACCGTG TACCAGAAAC GCGGCCAGGC CGACCAGCAA
GCCGCCCTGC TCGGCCAGCT GAAGGCCGCC TACGCCCGTG GCGCAGTGCC GGCCACCCGT
GTTGACAGCG TGGCCCGTGT GCTGGCCGAC CGTAGCCTTG GCCAGACCGA CGAAAAAACC
GCCAAGGACC TGCTCGAGCA AGTAGCCCCG GCCAACCCGG CGTCCTGGGT CAGCCTGGCA
CAGCTGGTAT ACGACTTCCC CGAACTGGGC GACACCGACC AGTTGATGGC CTACATCGAC
AAAGGCCGCG AAGCTGAACA GCCACGCGCC GAACTGCTGC TGGGCCGTCT GTACTACGAA
GGCAAAACCC TGCCAGCCGA CGCTCAAAAA GCCGAGCAGC ACCTGCAAGC CGCTGCCGAA
GCCGGTGAGA TCAGCGCCCA TTACTACCTG GGCCAGCTTT ACCGCCGCGG CTACCTGGGC
AATGTCGAGC CGCAGAAAGC CGTCGACCAC CTGCTGGCCG CCGCCCGTGG CGGGCAGAAC
AGCGCCGACT ATGCCTTGGC TCAGCTGTTC AGCGAGGGCC ACGGCATCCG CCCGCAACCG
GGCAACGCCT GGGTGTTCGC CCAGCTGTCG CAGGCCAACC CGACGCCGCA ATCAGCCGAA
CTGCTGCAGC AGCTCGACCA GCAACTGACA CCTGATCAGC GCAACCAGGC CCAGCAACTG
CTGGACCAGG AAAAGCGTGC ACGCGGCAGC CTGGCGCAGG GCGCGAATAG CACCCTGGCC
CTCGAAGCCC TGCAAGACGA CGAAAAAGAA GTAGACGGTG AGGACTCGCT ATGA
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| Protein sequence | MISDTYKVRV NLGLCALAAA ITLAGCAGLP DQRLANEAMK RGDTALAERN YKALADLGYS
EAQVGLADIK VATRDPSQIR EAEATYRAAA ATSPRAQARL GRLLVAKPDS TQAEREEAET
LLKQAASQGE SNTLIPLAML YLSYPQSFPK VNAQQQIDQW RAAGNPEAGL AQVLLYRTQG
TYDQHLGEVE KICKAALNTT DICYVELATV YQKRGQADQQ AALLGQLKAA YARGAVPATR
VDSVARVLAD RSLGQTDEKT AKDLLEQVAP ANPASWVSLA QLVYDFPELG DTDQLMAYID
KGREAEQPRA ELLLGRLYYE GKTLPADAQK AEQHLQAAAE AGEISAHYYL GQLYRRGYLG
NVEPQKAVDH LLAAARGGQN SADYALAQLF SEGHGIRPQP GNAWVFAQLS QANPTPQSAE
LLQQLDQQLT PDQRNQAQQL LDQEKRARGS LAQGANSTLA LEALQDDEKE VDGEDSL
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