| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4426 |
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| Symbol | |
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| ID | 5190546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4945886 |
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| End bp | 4946983 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588901 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001269730 |
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| Protein GI | 148549628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGCCC ATGTTTTCAA ACCCGATATG CCGCCACCGG TGAAAACCGT CGGCGTGCTC
GCATGGATGC GTGCCAATCT GTTCTCCAGC TGGCTCAACA CGCTGTTGAC CCTGTTCGCC
CTCTACCTGG TGTGGCTGAT CGTGCCGCCG TTGCTGCAGT GGGCGTTGAT CGATGCCAAC
TGGGTCGGCA CCACGCGCGC CGATTGCACC AAGGAAGGCG CCTGCTGGGT GTTCGTGCAG
CAGCGCTTTG GCCAGTTCAT GTACGGCTAT TACCCGACTG AGCTGCGCTG GCGTGTGGAC
CTGACCGTGT GGCTTGCCAT GCTCGGCGCC GCGCCGCTGT TCATCAAGCG TTTCCCGCGC
AAGGCCTTCT ATGGCCTGGG CTTCCTGGTG CTGTACCCGG TACTGGCCTA TACCCTGCTG
CACGGTGGGT ACCTGGGCCT GGAAAGCGTA CCGACCAGCC AGTGGGGCGG GTTGATGCTG
ACCCTGGTGA TCGCCACCGT GGGCATCGTC GGCGCCTTGC CGCTGGGCAT CCTGCTGGCA
CTGGGCCGGC GTTCGAGGAT GCCGGCCGTG AAAGTGGTGT GCGTGACCTT CATCGAGTTC
TGGCGGGGCG TACCGCTGAT CACCGTGCTG TTCATGTCGT CGGTGATGCT GCCGTTGTTC
CTGCCAGAAG GTATGAGCTT CGACAAGCTG CTGCGGGCGA TGATCGGTGT GATCCTGTTC
CAGTCGGCGT ACATCGCCGA GGTGGTGCGC GGCGGCCTGC AGGCCATCCC CAAGGGCCAG
TACGAAGCCG CCGCGGCCAT GGGCCTTGGC TACTGGCGCT CGATGGGGCT GGTGATCTTG
CCGCAGGCGC TGAAGCTTGT GATTCCCGGC ATCGTCAACA CCTTCATTGC CCTGTTCAAG
GACACCAGCC TGGTGATCAT CATCGGCCTG TTCGACCTGC TGAACAGCGT CAAGCAAGCC
GCGGCCGACC CGGCCTGGCT GGGCATGGCT ACCGAGGGCT ACGTGTTCGC CGCCCTGGTG
TTCTGGATTT TCTGTTTCGG TATGTCCCGC TACTCCATGC ATCTGGAGCG CAAGCTGGAC
ACTGGCCACA AGCGTTAG
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| Protein sequence | MNAHVFKPDM PPPVKTVGVL AWMRANLFSS WLNTLLTLFA LYLVWLIVPP LLQWALIDAN
WVGTTRADCT KEGACWVFVQ QRFGQFMYGY YPTELRWRVD LTVWLAMLGA APLFIKRFPR
KAFYGLGFLV LYPVLAYTLL HGGYLGLESV PTSQWGGLML TLVIATVGIV GALPLGILLA
LGRRSRMPAV KVVCVTFIEF WRGVPLITVL FMSSVMLPLF LPEGMSFDKL LRAMIGVILF
QSAYIAEVVR GGLQAIPKGQ YEAAAAMGLG YWRSMGLVIL PQALKLVIPG IVNTFIALFK
DTSLVIIIGL FDLLNSVKQA AADPAWLGMA TEGYVFAALV FWIFCFGMSR YSMHLERKLD
TGHKR
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