Gene Pput_4415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4415 
Symbol 
ID5190724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4934706 
End bp4935143 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640588892 
Producthypothetical protein 
Protein accessionYP_001269721 
Protein GI148549619 
COG category[S] Function unknown 
COG ID[COG3105] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.436054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTCT CGCTCCTTGT TTGGTTGTTG CCAACCCTGG CCCTGGTCAT CGGTGTGGCA 
GTCGGTTTCA TTGTTGCCCG CCTGCTGCCC AATGCGGCCC CGAGCAACAC CCAGCGTCAA
CTGGATGACA TCCAGAAGCG CTTCGACAGC TACCAGAACG AAGTGGTCAC CCACTTCAAC
AGCACCGCCA TGCTGGTCAA GAAACTGACC CAGAGCTATC AGGACGTACA GGATCACCTG
GCTGAAGGCG CCAACAGCCT GGCCCTCGAT GACGTCACCC GCCAACGCCT GCTGGCTGCG
CTGCACTCCG ATGCACCGCA AGGCCCGCGT GACCGCCTGA CCCCACCTAA AGACACCGCC
GAAGTGCCGC GCGACTATGC GCCGAAAGTG CCTAACTCGC CGGGCATGCT GGATGAGAGC
TACGGGCTCA AGCGTTGA
 
Protein sequence
MELSLLVWLL PTLALVIGVA VGFIVARLLP NAAPSNTQRQ LDDIQKRFDS YQNEVVTHFN 
STAMLVKKLT QSYQDVQDHL AEGANSLALD DVTRQRLLAA LHSDAPQGPR DRLTPPKDTA
EVPRDYAPKV PNSPGMLDES YGLKR