| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4409 |
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| Symbol | rplM |
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| ID | 5191668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4928309 |
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| End bp | 4928737 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640588886 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001269715 |
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| Protein GI | 148549613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.867094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.414733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACTT TTACTGCTAA ACCGGAAACA GTAAAGCGCG AGTGGTTCGT AGTCGACGCC
GCTGGCCAGA CCCTGGGTCG TCTGGCTACC GAAATCGCTA CCCGTCTGCG TGGCAAACAC
AAACCAGAAT ACACCCCTCA CGTTGACACC GGCGACTACA TCGTCGTTAT CAACGCCGAG
CAGGTTCGTG TGACTGGTGC CAAGTCTTCC GACAAAATGT ACTACTCCCA CTCCGGTTTC
CCAGGCGGTA TCAAGGAAAT CAACTTCGAG AAGTTGATCG CCAAGGCCCC TGAGCGTGTT
ATCGAAACTG CGGTCAAAGG CATGCTGCCT AAGAACCCGC TGGGTCGCGA CATGTACCGC
AAGCTGAAAG TGTACGCGGG TGCTGCTCAC CCACACACTG CTCAGCAGCC TCAAGAACTG
AAGATCTAA
|
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| Protein sequence | MKTFTAKPET VKREWFVVDA AGQTLGRLAT EIATRLRGKH KPEYTPHVDT GDYIVVINAE
QVRVTGAKSS DKMYYSHSGF PGGIKEINFE KLIAKAPERV IETAVKGMLP KNPLGRDMYR
KLKVYAGAAH PHTAQQPQEL KI
|
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