Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4406 |
Symbol | |
ID | 5190893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4925835 |
End bp | 4927049 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640588883 |
Product | cytochrome b/b6 domain-containing protein |
Protein accession | YP_001269712 |
Protein GI | 148549610 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.232418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCA AGTTCATGGA CTGGATTGAT GCTCGCTTCC CCGCCACCAA GATGTGGGAA GACCACCTCA GCAAATATTA CGCACCCAAG AACTTCAACT TCCTGTACTT CTTCGGCTCC CTGGCATTGC TGGTGCTGGT CAACCAGATC GTGACCGGCG TGTGGCTGAC CATGAGCTTC ACGCCCTCGG CGGAAGAGGC GTTCGCCTCG GTCGAGTACA TCATGCGCGA CGTGGAATAC GGCTGGATCC TGCGCTACCT GCACTCCACG GGGGCGTCGG CGTTCTTCAT CGTGGTCTAC CTGCACATGT TCCGTGGCCT GCTTTATGGC TCCTATCAGA AGCCACGCGA GCTGGTCTGG CTGTTCGGCA TGCTGATCTA TCTGGCGCTG ATGGCTGAAG CGTTCATGGG CTACCTGCTG CCATGGGGGC AGATGTCGTA CTGGGGCGCC CAGGTGATCA TCTCGCTGTT CGGTGCCATC CCGGTGATCG GTGATGACCT TACCCAGTGG ATCCGTGGTG ACTACCTGAT CTCGGGCATT ACCCTGAACC GCTTCTTCGC CCTGCATGTG GTTGCCCTGC CCATCGTGAT TCTTGGCCTG GTGGTATTGC ACATCCTCGC CCTGCACGAA GTGGGTTCGA ACAACCCTGA TGGCGTCGAC ATCAAGAAGA AAAAGGACGA AAACGGTATT CCGCTGGATG GTATTCCGTT CCACCCGTAC TACACCGTCA AAGACATTGT CGGCGTGGTG GTGTTCCTGT TCGTGTTCTG CGCCGTGGTG TTCTTCTTCC CTGAAATGGG CGGTTACTTC CTGGAGAAAC CTAACTTCGA GCAGGCCAAC GCCTTCAAGA CCCCAGAGCA CATCGCGCCG GTGTGGTACT TCACACCGTT CTACGCAATC CTGCGTGCGG TGCCTGACAA ACTGATGGGC GTCATTGCCA TGGGGGCGGC CATCGCCGTG CTGTTCGTAC TGCCCTGGCT CGACCGCAGC CCGGTGCGTT CCATGCGTTA CAAGGGCTGG ATCAGCAAGG TCTTCCTGCT GGTGTTCTGC GTGGCCTTCG TCATCCTCGG CGTGCTGGGC GTACTGGCAC CGACACCTGG GCGTACTTTG CTGTCGCAGG TATGCACGGT GCTGTACTTC GCCTACTTCC TGCTGATGCC GTTCTACACA AGGCTTGAGA AGACCAAACC GGTTCCGGAA AGGGTGACTG GCTGA
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Protein sequence | MMSKFMDWID ARFPATKMWE DHLSKYYAPK NFNFLYFFGS LALLVLVNQI VTGVWLTMSF TPSAEEAFAS VEYIMRDVEY GWILRYLHST GASAFFIVVY LHMFRGLLYG SYQKPRELVW LFGMLIYLAL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTQW IRGDYLISGI TLNRFFALHV VALPIVILGL VVLHILALHE VGSNNPDGVD IKKKKDENGI PLDGIPFHPY YTVKDIVGVV VFLFVFCAVV FFFPEMGGYF LEKPNFEQAN AFKTPEHIAP VWYFTPFYAI LRAVPDKLMG VIAMGAAIAV LFVLPWLDRS PVRSMRYKGW ISKVFLLVFC VAFVILGVLG VLAPTPGRTL LSQVCTVLYF AYFLLMPFYT RLEKTKPVPE RVTG
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