| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4405 |
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| Symbol | |
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| ID | 5190892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4925056 |
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| End bp | 4925835 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640588882 |
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| Product | ubiquinol--cytochrome c reductase, cytochrome c1 |
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| Protein accession | YP_001269711 |
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| Protein GI | 148549609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.217813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TGATTGCAGT ATTTTTGCTG GCAGTGATGC CTGCCTTTTC CTTCGCTGCC
GAAACTGGCC TGGAGCTGGA CAAGGTCGAT ATCGACCTGA CTGACAAGGC CGCTATGCAG
GATGGTGCGC GTACCTTCGC CAACTATTGC ATGGGGTGTC ACAGTGCCAA GTTCCAGCGT
TACGAGCGTG TGGCTGATGA CCTGGGTATC CCGCATGAAT TGATGCTCGA GAAGCTGGTG
TTCACGGGCG CCAAGATTGG TGACCACATG CAGATCGGCA TGAAGCCCAG CGACGCCAAG
ACCTGGTTTG GTGCCGCGCC GCCCGACCTG ACCCTGGTTG CCCGCGTGCG CGGTACCGAT
TGGCTTTACA CCTACCTGCG CAGCTTCTAT GAGGACCCAT CGCGCCCTTA CGGGGTGAAC
AACAAGGTGT TCCCGAACGT CGGCATGCCT AACGTGCTGG TTGGTCTGCA AGGTAACCAG
GTGGTGGGTT GCAAGCAGGT GCAGACGGTG GTCGAGGGCA AGAAGCAATT CGACCCGTTG
ACCGGCAGCC CGTTGACCCA TGAAGCTTGC GATCAGCTGA CCATTACGCC GAATTCCGGT
ACCCTGACGA CCGAGCAGTT CGACGAGAAG GTCAAGAACC TTGTGACCTT CCTGGCCTAT
TCGGCCAACC CAGTCAAACT GGAAAGCCAG CGCATCGGCA CCTATGTGTT GCTGTACCTG
GCTTTCTTCT TCGTATTCGC CTACTTGCTC AAGCGTGAAT ACTGGAAGGA CGTGCACTGA
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| Protein sequence | MKKLIAVFLL AVMPAFSFAA ETGLELDKVD IDLTDKAAMQ DGARTFANYC MGCHSAKFQR
YERVADDLGI PHELMLEKLV FTGAKIGDHM QIGMKPSDAK TWFGAAPPDL TLVARVRGTD
WLYTYLRSFY EDPSRPYGVN NKVFPNVGMP NVLVGLQGNQ VVGCKQVQTV VEGKKQFDPL
TGSPLTHEAC DQLTITPNSG TLTTEQFDEK VKNLVTFLAY SANPVKLESQ RIGTYVLLYL
AFFFVFAYLL KREYWKDVH
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