Gene Pput_4403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4403 
Symbol 
ID5193673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4923874 
End bp4924305 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content59% 
IMG OID640588880 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001269709 
Protein GI148549607 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.209502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA GTCGCCCCTA TCTGGTTCGA GCACTGTACG AGTGGATCGT CGACAACGAT 
TGCACGCCCC ATATGCTGGT CAATGCCGAA TTCCCGAAAG TTCAGGTGCC GGATGGTTTC
GCCAGTGATG GCCAGATCGT CTTGAATATC TCGCCAAGTG CCGTGCGTAG CCTGCACATG
GACAATGACG CAGTCAGCTT CGAGGGCCGC TTCAGTGGCG TGGCTCACTC GCTGTTCGTG
CCGGTTGGTG CAATCCTGGG TATCTACGCC CGCGAAAATG GCCAGGGTAT GGTCTTCGAG
CTGGAGCCGT CTTCGATGGA TGGCGACGAG CTGGAAGACG ATGATGTGCA GCCGGATGAC
GATGGCCCGC CAGACGATGG AGGGCAGCCG CCGCGTCCGA CTGGCCGGCC AAGCCTGAAA
GTGGTCAAGT AA
 
Protein sequence
MNSSRPYLVR ALYEWIVDND CTPHMLVNAE FPKVQVPDGF ASDGQIVLNI SPSAVRSLHM 
DNDAVSFEGR FSGVAHSLFV PVGAILGIYA RENGQGMVFE LEPSSMDGDE LEDDDVQPDD
DGPPDDGGQP PRPTGRPSLK VVK