| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4402 |
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| Symbol | |
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| ID | 5193832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4923236 |
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| End bp | 4923814 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588879 |
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| Product | transport-associated |
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| Protein accession | YP_001269708 |
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| Protein GI | 148549606 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.148625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTA TGCGCCTCGG CCTGATGGCC CTGACCCTGT GCCTGAGCGT CACTGGTTGC
AGCTCGGTAC TCACCTCTAC CCGCAATTCG CCGATCGAGG ACGATCGCGG CACGCGCACC
ATCGGCAGCA AGATCGACGA CTCGCTGATC GAGACCAAGG CTGCCGTGAA CATTTCCAAA
GCCAATCCAG ACCTGGACAA GGGCTCGCAC ATCGTTGTCA GCAGCTACAA CGGTATCGTC
CTGCTGGCCG GGCAGACCCC ACGCGCTGAC CTCAAGAGCC TCGCGGAGCA AACGGCCAGC
CAGGTCCAAC GGGTCAAGAA AGTACACAAT GAGCTGCAAG TGATGCAGCC CTCTTCCATT
CTGGCGCGCA ACAACGACGC CTGGCTGACC ACCAAGATCA AGACCCAGAT GCTGACCGAC
AACGCCGTGC CCAGCTCGCG CATCAAGGTG ATTACCGAAA ACGGCATCGT CTATCTGCTG
GGTCTGGTCA CCCGCCAAGA AGCCAACTCG GCCACTGCCG TGGTGCAGGG CGTGTCGGGC
GTGCAGAAGA TCGTCAAGCT GTTCGAGTAC ATCGATTGA
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| Protein sequence | MTPMRLGLMA LTLCLSVTGC SSVLTSTRNS PIEDDRGTRT IGSKIDDSLI ETKAAVNISK
ANPDLDKGSH IVVSSYNGIV LLAGQTPRAD LKSLAEQTAS QVQRVKKVHN ELQVMQPSSI
LARNNDAWLT TKIKTQMLTD NAVPSSRIKV ITENGIVYLL GLVTRQEANS ATAVVQGVSG
VQKIVKLFEY ID
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