| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4401 |
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| Symbol | gmhA |
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| ID | 5193831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4922646 |
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| End bp | 4923239 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588878 |
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| Product | phosphoheptose isomerase |
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| Protein accession | YP_001269707 |
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| Protein GI | 148549605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0279] Phosphoheptose isomerase |
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| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.152156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATGC AATCCCGAAT TCGCCGGCTG TTCGAGGCCA GCATCGAAAC CAAGCAACAG
GCAATGGACA TCCTGGCACC GCACATCGAG CAGGCCAGTC TGGTCATGGT CAATGCGTTG
CTCAACGAGG GCAAGATGCT CGCCTGCGGC AACGGCGGCT CGGCCGGCGA TGCCCAGCAC
TTTTCATCGG AGCTGCTCAA CCGCTTCGAG CGCGAGCGTC CCAGCCTGCC AGCCATCGCG
CTGACCACCG ACAGCTCGAC CCTGACCTCG ATCGCCAACG ACTACAGCTA CAACGAAGTC
TTTTCCAAGC AGATCCGCGC CCTGGGCCAG CCCGGTGACG TTCTGCTGGC GATCTCCACC
AGCGGCAATT CGGCCAACGT AATCCAGGCA ATCCAGGCCG CACATGACCG TGAAATGATT
GTCGTAGCAT TGACGGGTCG CGATGGCGGC GGAATGGCTT CGCTGCTGCT GCCCGAGGAC
GTGGAAATCC GCGTGCCTTC GACAGTTACC GCGCGTATCC AGGAAGTCCA CCTGCTGGCG
ATCCACTGCC TGTGCGATCT GATCGACAGC CAACTGTTCG GGAGTGAAGA ATGA
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| Protein sequence | MDMQSRIRRL FEASIETKQQ AMDILAPHIE QASLVMVNAL LNEGKMLACG NGGSAGDAQH
FSSELLNRFE RERPSLPAIA LTTDSSTLTS IANDYSYNEV FSKQIRALGQ PGDVLLAIST
SGNSANVIQA IQAAHDREMI VVALTGRDGG GMASLLLPED VEIRVPSTVT ARIQEVHLLA
IHCLCDLIDS QLFGSEE
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