Gene Pput_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4390 
SymbolmraY 
ID5194730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4911194 
End bp4912276 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content62% 
IMG OID640588867 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001269697 
Protein GI148549595 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0475086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.267349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC TGTTGGCCGA GTATCTGCAA CAGTTCCACA AAGGCTTTGC GGTCTTTCAG 
TACCTGTCCC TGCGCGGGAT TCTTGGCGTA CTGACCGCAT TGTCCCTGGC GCTGTGGCTG
GGCCCCTGGA TGATCCGTAC CCTGCAAATT CGCCAAATCG GCCAGGCCGT GCGTAACGAC
GGCCCGCAAT CGCACCTGTC CAAGTCCGGC ACCCCGACCA TGGGTGGTGC GCTGATCCTG
TCGGCCATCG CCGTCAGCAC CTTGCTGTGG GCCGACCTGA GCAACCGCTA TGTTTGGGTT
GTGCTGATCG TCACCCTGGC GTTCGGTGCC ATTGGCTGGG TCGATGACTA CCGCAAGGTG
ATCGAAAAGA ACTCGCGTGG CCTTCCGAGC CGCTGGAAGT ACTTCTGGCA GTCGGTGTTC
GGCCTGGCGG CGGCGGTGTT CCTGTACAAA ACGGCGCCAA CCAGCGTCGA GACCACGCTG
ATCCTGCCGT TCATCAAGGA TGTCACCATT CCGCTGGGCG TCGGCTTCGT CGTACTGACC
TACTTCGTCA TTGTCGGCTC GAGCAACGCG GTCAACCTCA CCGATGGCCT TGACGGCCTG
GCAATCATGC CGACGGTGAT GGTCGGCGGC GCGCTGGGCA TCTTCTGCTA CCTGTCGGGT
AACGTGAAGT TCGCCGAGTA CCTGCTGATC CCCTACGTGC CGGGCTCGGG CGAGCTGATC
GTGTTCTGCG GCGCGCTGAT CGGTGCCGGC CTGGGCTTCC TGTGGTTCAA CACATACCCG
GCGCAAGTGT TCATGGGTGA CGTCGGCGCG CTGGCGCTGG GCGCCGCGCT GGGCACCATC
GCCGTCATCG TGCGCCAGGA AATCGTGCTG TTCATCATGG GCGGCATCTT CGTGGTGGAA
ACCCTGTCGG TGGTCATCCA GGTCGCTTCC TTCAAGCTGA CCGGCAAGCG CGTGTTCCGC
ATGGCGCCGA TCCACCACCA CTTTGAACTC AAGGGCTGGC CAGAGCCCCG GGTGATCGTC
CGATTCTGGA TCATCACCGT GATCCTGGTA CTGATTGGCC TTGCAACCCT GAAACTGAGG
TAG
 
Protein sequence
MLLLLAEYLQ QFHKGFAVFQ YLSLRGILGV LTALSLALWL GPWMIRTLQI RQIGQAVRND 
GPQSHLSKSG TPTMGGALIL SAIAVSTLLW ADLSNRYVWV VLIVTLAFGA IGWVDDYRKV
IEKNSRGLPS RWKYFWQSVF GLAAAVFLYK TAPTSVETTL ILPFIKDVTI PLGVGFVVLT
YFVIVGSSNA VNLTDGLDGL AIMPTVMVGG ALGIFCYLSG NVKFAEYLLI PYVPGSGELI
VFCGALIGAG LGFLWFNTYP AQVFMGDVGA LALGAALGTI AVIVRQEIVL FIMGGIFVVE
TLSVVIQVAS FKLTGKRVFR MAPIHHHFEL KGWPEPRVIV RFWIITVILV LIGLATLKLR