| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4386 |
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| Symbol | murC |
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| ID | 5195139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4906120 |
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| End bp | 4907568 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588863 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001269693 |
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| Protein GI | 148549591 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0804649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.186953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAGA GCCAGAAAGC CATGCCCCAG CCGAAGATGG GCCGTATTCG CCGCATTCAC
TTCGTCGGCA TCGGCGGCGT GGGCATGTGC GGTATTGCCG AAGTGTTGCT GAACCTGGGC
TATGAAGTGT CCGGTTCGGA CCTTAAAGCC TCGCCGGTGA CCGAGCGCCT GGAGTCCTTT
GGCGCTGAGA TCTTCGTCGG CCACCGCGCC GAGAACGCTG CCACCGCCGA TGTGTTGGTG
GTGTCCAGCG CCATCAACCC GGCCAACCCG GAAGTTGCCA CCGCACTGGA GCGGCGCATT
CCGGTGGTGC CGCGTGCCGA GATGCTCGCC GAGCTGATGC GTTACCGCCA TGGCGTGGCC
GTTGCCGGTA CTCACGGCAA GACCACCACG ACCAGCCTGC TGGCTTCAGT GTTCGCCGCC
GGTGGCCTGG ACCCAACCTT CGTTATCGGT GGCCGTCTTA CCGCTGCCGG TACCAATGCG
CAGCTGGGCA CCAGCCGCTA CCTGATCGCT GAAGCAGACG AAAGCGATGC CAGCTTCCTG
CACCTGCAGC CGATGGTCGC GGTTGTCACC AACATCGACG CCGACCACAT GGCGACCTAC
GAAGGTGACT TCAACAAGCT GAAGAAAACC TTCGTCGAGT TCCTGCACAA CCTGCCGTTC
TATGGGCTGG CGGTGATGTG CCTGGACGAC CCGGTGGTTC GCGAGATCCT GCCGCAGGTG
AAGCGCCCGA CCGTGACCTA CGGCTTCAGC GAAGAGGCCG ACATCCGCGC CATCAATGTG
CGTCAGCAGG GCATGCAGAC CCACTTCACC GTGCTGCGCC GTGATCGCGA GCCGTTGGAG
GTTTCGGTGA ACATGCCCGG CAACCACAAC GTGCTCAACG CCCTGGCGAC CATCGCCATC
GCCACTGACG AAGGCATTAC TGACGAGGCC ATCGTCCAGG GCCTGTCCGG CTTCCAGGGT
GTCGGTCGTC GCTTCCAGGT ATACGGCGAG CTGCCGGTCG AAGGCGGCAG TGTGATGCTG
GTTGACGACT ACGGTCATCA CCCCACCGAA GTGGCGGCGG TGATCAAGGC TGTGCGCGGT
GGCTGGCCAA GCCGCCGCCT GGTGATCGTC TACCAGCCGC ACCGCTACAG CCGCACCCGC
GACCTGTACG ACGATTTCGT CCAGGTGCTG GGCGATGCCA ACGTGCTGCT GCTGATGGAG
GTCTACCCGG CCGGCGAAGA GCCGATCCCC GGTGCCGACA GCCGTCAGCT GTGCCACAGC
ATCCGCCAGC GCGGCAAGCT GGACCCGATC TACATCGAGC GCGGCGTCGA GCTGGCACCG
CTGGTCAAGC CACTGCTGCG CGCTGGCGAC ATTTTGATCT GTCAGGGTGC CGGTGATGTC
GGCGGCCTGG CCCCGCAGTT GATGAAAAGC CCGCTGTTCG CAGGCGCCAA GCAGGAGAAG
TCGAAATGA
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| Protein sequence | MVESQKAMPQ PKMGRIRRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKA SPVTERLESF
GAEIFVGHRA ENAATADVLV VSSAINPANP EVATALERRI PVVPRAEMLA ELMRYRHGVA
VAGTHGKTTT TSLLASVFAA GGLDPTFVIG GRLTAAGTNA QLGTSRYLIA EADESDASFL
HLQPMVAVVT NIDADHMATY EGDFNKLKKT FVEFLHNLPF YGLAVMCLDD PVVREILPQV
KRPTVTYGFS EEADIRAINV RQQGMQTHFT VLRRDREPLE VSVNMPGNHN VLNALATIAI
ATDEGITDEA IVQGLSGFQG VGRRFQVYGE LPVEGGSVML VDDYGHHPTE VAAVIKAVRG
GWPSRRLVIV YQPHRYSRTR DLYDDFVQVL GDANVLLLME VYPAGEEPIP GADSRQLCHS
IRQRGKLDPI YIERGVELAP LVKPLLRAGD ILICQGAGDV GGLAPQLMKS PLFAGAKQEK
SK
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