| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4376 |
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| Symbol | |
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| ID | 5193400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4893999 |
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| End bp | 4894943 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588853 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269683 |
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| Protein GI | 148549581 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0352] Thiamine monophosphate synthase
[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00586] mutator mutT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0336257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGGA TTCATGTAGT AGCTGCCGTG ATTCGCGGCG CTGATGGCCG TATTCTGATC
GCACGCCGTG CCGATACCCA GCACCAGGGC GGCTTGTGGG AGTTCCCCGG TGGCAAGGTG
GAAGAAGGCG AAAGCGTCGA AGCGGCGCTT GCCCGCGAGT TGCGCGAGGA GCTGGGCATC
GAGGTAAGCC ATTCGCGTGC GCTGATCAAG GTCAGCCATG ACTACCCGGA CAAGCAGGTG
CTGCTGGACG TGCGCGAGGT CGAAGCGTTC ACTGGCGAAC CCCATGGTGC CGAAGGCCAG
CCGCTGGAGT GGGTTGCCCC GCGCGATTTG CCGCAGTACG AATTCCCCGA GGCCAACAAG
CCGATCGTCG CCGCTGCGCG CCTGCCGGAC CAGTACCTGA TCACCCCGGA CGGCCTGGAA
GTGCCGCAAA TGCTCAAGGG CATCCAGAAG GCGGTGGCCA ATGGTATTCG CCTGATCCAG
TTGCGTGCCC CGGACATGTA CGACCCCAAG TACCGCGACG TGGCGGTGGA TGCGGTCGGG
CTGTGTGCGG GCAAGGCGCA GCTGATGCTT AAAGGGCCAC TGGAATGGCT GGGTGATTTC
CCGGCGGCCG GTTGGCACCT GACGGCCGCG CAGCTGCGCA AGTACGCCGC CAGGGGCCGA
CCGTTCCCCA AGGAGCGCTG GTTGGCGGCA TCCTGCCACA GTGCCGAAGA GCTGGCGCTG
GCTGAGCAGA TGGGCGTGGA CTTTGTCACC CTGTCGCCAG TGCAGGCGAC CCAGACTCAC
CCAGAGGCGG TGCCGTTGGG ATGGGATGAG GCGCAGCGGT TGATTGCCGG GTTCAACAAG
CCGGTTTACC TGCTGGGTGG GGTAGGGCCG GGTGAGCGCG AGCAGGCCTG GGAAGCCGGG
GCACAGGGTG TAGCCGGGAT CCGGGCGTTC TGGCCCGAGG TTTGA
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| Protein sequence | MKRIHVVAAV IRGADGRILI ARRADTQHQG GLWEFPGGKV EEGESVEAAL ARELREELGI
EVSHSRALIK VSHDYPDKQV LLDVREVEAF TGEPHGAEGQ PLEWVAPRDL PQYEFPEANK
PIVAAARLPD QYLITPDGLE VPQMLKGIQK AVANGIRLIQ LRAPDMYDPK YRDVAVDAVG
LCAGKAQLML KGPLEWLGDF PAAGWHLTAA QLRKYAARGR PFPKERWLAA SCHSAEELAL
AEQMGVDFVT LSPVQATQTH PEAVPLGWDE AQRLIAGFNK PVYLLGGVGP GEREQAWEAG
AQGVAGIRAF WPEV
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