| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4374 |
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| Symbol | |
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| ID | 5194708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4891262 |
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| End bp | 4893292 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588851 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001269681 |
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| Protein GI | 148549579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0796172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGC GCCAACGCCT GGAAAACCTC CCGGTCGGGC AGAAGCTGCT GGCGGCCCTG
CTGGTACTGC TGGTGACCAT CTTGCTGATG GCCAACCTCA CCTTCATCAG CGCCGCCTAC
TGGATCACCC AGGAAAGCAT GGCGCCGCAG GCTATGCACA CCATCGGCCG GCTGGTGGCC
AATCCACAGC TTGCAGCCCG CGCCGGCGAC ACCCCGGACA CGGCCCGTGC CCTGCTCAAG
GAACTGGACA GTTACACACC GCTTCGCGCC GCCGCCATCT ACGGTGGCGA TGGCCGAATG
CTGGCGCAGT TGCAACATGG CGAGCCGCTG GCCCTGCCCA AGCGTTTTCG CAACATCGAC
GGCTGGCGCC TGATGGAGTT TCGCAGCACT CAGTTGATCC GCATCCCCCG CGATGCCAAC
CCACCGGCAC ATTTGCTGCT GGTAGCCAGC AGCGAACTGC CCACGGCCTT CTACACCGGC
ACACTCAGCG CCAGCCTGGG CATCCTGGTG TTCAGTGTCC TGCTATGGAT CGTCATCGCC
CGGCAGATCA AACGCCTGAT CACCCAGCCG ATCAACCAGC TTGAGGAGCT CAGCCGCCAG
GTTACCCGCG AAGAGAGCTA CGCCTTGCGT GCCCAGCGCG GCAATGACGA TGAAATCGGC
AGCCTGGCCG AGGCCTTCAA CACCATGCTG TCGCGCATCG AGGCCCGCGA GCAGCAGCTC
AAGAGCGCCC GCGACGAGTT CCAGAGTGCC TACGACCAGG CTCAGGGCCT TGCCGAAGAA
ACCCGCCACA CCAACCGCAA GCTGGAACTG GAAGTACAGG TACGCAGCAA GATCGAGAAA
AAGCTCACCG GTTTTCAGAA CTACCTCAAC AGCATCATCG ACTCGATGCC CTCGGCACTG
ATCGCCCTCG ACGAACAGCT CTACGTGACC CAATGGAACC ACGAAGCCAC GGTGCTTTCC
GGCACGCCAC TGGACGAGGC ACTTAACCAG CCGGTGTTCA TTGCGTTCGA GCCGCTGAAG
CCGTTCCTCC CGCAACTGAA GGAAACCGTG GAAAAACATC GAGTGGCGAA GATCGAGCGG
GTAACCTGGC CCAAGGGCGA CGACCTGCGC CACTACGCCC TGACCTTCTA CCCACTGACG
GGCGGCGGCG GGCGCGGCGT GGTCATTCGT ATCGACGACA TCACCCAGCG TCTGTCGTTG
GAAGAGATGA TGGTGCAGTC AGAAAAAATG CTCTCGGTCG GGGGGCTGGC TGCCGGCATG
GCGCACGAAA TCAACAACCC GCTGGGCGCT ATCCTGCACA ACGTGCAGAA CATTCGCCGA
CGCCTGTCGT CCGACCTGCC GCGCAACCAG GAACAGGCCG AAGAGCTGGG CATCGACCTG
GCCACGATCA ACCGCTACCT GGACAGCCGC GAGGTGCCGC AACTGCTCGA CGGCATTCAG
CAGGCCGGTG CCCGGGCGGC GAAGATCGTC ACCCACATGC TCAGCTTCAG CCGCCGCAGC
AACCGCCAGC TGGTGCCATG CGAGCTGCCG GCACTGATCG ATCAGGCGCT TGAAATTGCC
GGCAATGACT TCGATCTGGC CATTGGCTTC GACTTCAAGG GGCAAGCCAT CGTGCGCCAG
TTCGACCCCG ACCTGGGGCC GGTCCCATGC ACCGCCAACG AGCTGGAACA AGTACTGCTC
AACTTGCTGA AGAATGCAGC CCAGGCCATC CACCAACGCC CGCAACCCAG CGAGCCCGGA
CGCATCACAC TGCGCACCCG GCTAAACCCG CCATGGGCAG AAATCCAGGT CGAGGACAAC
GGCGTCGGCA TGCCCGAGGC AGTGCGCAAG CGCACCTTCG AGCCGTTTTT CACCACCAAG
GAAATCGGCC AGGGTACCGG GCTGGGCCTG TCGGTCTCGT ACTTCATCAT CACCAACAAC
CACAAGGGGC AGATGGAAGT GCAATCCACG CCAGGCCAAG GCACCTGCTT TACCCTACGC
CTGCCCCTCA CCCAGCCGGC AGCGGCGGTG CCGGCCAGAA CGGAGCAATG A
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| Protein sequence | MTLRQRLENL PVGQKLLAAL LVLLVTILLM ANLTFISAAY WITQESMAPQ AMHTIGRLVA
NPQLAARAGD TPDTARALLK ELDSYTPLRA AAIYGGDGRM LAQLQHGEPL ALPKRFRNID
GWRLMEFRST QLIRIPRDAN PPAHLLLVAS SELPTAFYTG TLSASLGILV FSVLLWIVIA
RQIKRLITQP INQLEELSRQ VTREESYALR AQRGNDDEIG SLAEAFNTML SRIEAREQQL
KSARDEFQSA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAL
IALDEQLYVT QWNHEATVLS GTPLDEALNQ PVFIAFEPLK PFLPQLKETV EKHRVAKIER
VTWPKGDDLR HYALTFYPLT GGGGRGVVIR IDDITQRLSL EEMMVQSEKM LSVGGLAAGM
AHEINNPLGA ILHNVQNIRR RLSSDLPRNQ EQAEELGIDL ATINRYLDSR EVPQLLDGIQ
QAGARAAKIV THMLSFSRRS NRQLVPCELP ALIDQALEIA GNDFDLAIGF DFKGQAIVRQ
FDPDLGPVPC TANELEQVLL NLLKNAAQAI HQRPQPSEPG RITLRTRLNP PWAEIQVEDN
GVGMPEAVRK RTFEPFFTTK EIGQGTGLGL SVSYFIITNN HKGQMEVQST PGQGTCFTLR
LPLTQPAAAV PARTEQ
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