Gene Pput_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4372 
Symbol 
ID5193069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4889721 
End bp4890206 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID640588849 
Productputative nucleotide-binding protein 
Protein accessionYP_001269679 
Protein GI148549577 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0514431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGT TCGACGTGGT ATCGGAACTG GACAAGCACG AAGTGCAGAA CGCGGTCGAC 
AACGCCATCA AGGAACTGGA CCGCCGCTAC GACCTCAAGG GCAAAGGCAC CTTCGAGTTC
AAGGACAAAG AGCAGACCGT GATGCTCACT GCTGAGGAAG AGTTCCAGCT CGAGGCGATG
CTGGAGATCC TGCGCCTTGC ACTGGTCAAG CGCAAGATCG ACGTGAAGTG CCTGGAAACC
AAGGACCCCT ACGCCTCCGG CAAGGAAAAG AAACAGGAAG CCAAGTTCCG CGAAGGCATC
GACAAGGACC TGGCAAAAAA GATCGTTGCC ACCATCAAGG ATGGCAAGCT GAAAGTACAA
GCCGCCATCC AGGGTGAGCA GGTACGGGTA ACCGGCAAGA AACGTGACGA TCTGCAGGAA
GCCATTGCCC TGCTGCGCAC CAAGGAATTC GACATGCCGC TGCAGTTCAA CAACTTCCGC
GACTGA
 
Protein sequence
MPSFDVVSEL DKHEVQNAVD NAIKELDRRY DLKGKGTFEF KDKEQTVMLT AEEEFQLEAM 
LEILRLALVK RKIDVKCLET KDPYASGKEK KQEAKFREGI DKDLAKKIVA TIKDGKLKVQ
AAIQGEQVRV TGKKRDDLQE AIALLRTKEF DMPLQFNNFR D