| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4371 |
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| Symbol | |
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| ID | 5193790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4888762 |
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| End bp | 4889604 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588848 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001269678 |
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| Protein GI | 148549576 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.053495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGA ACGCTGAGGT CGACCAGCTC GTCCGCCAAT CCCAGACGTG GATCCCTTTG
ATCATGGAAT ACGGCAGCCG TGTGCTGCTG GCACTGCTGA CCTTGGCGGT TGGCTGGTGG
ATCATCAACA AGGTCAGCGC CCGCCTCGGC AAGCTGGTTG GCCTGCGCAA CGCCGACCTG
GCGCTGCAGG GCTTCATCAG CACCCTGGCG AACATCGTGC TGAAGGTGCT GCTGTTGGTC
AGCGTGGCTT CGATGATCGG CATCGAGACC ACCTCGTTCG TCGCCGCCAT CGGTGCCGCA
GGCCTGGCCA TCGGCCTTGC CTTGCAGGGC AGCCTGGCGA ACTTCGCCGG TGGTGTGTTG
ATCCTGATGT TCCGCCCGTT CCGTATCGGT GACTGGATCG AGGCGCAGGG CGTTGCCGGC
ACCGTCGACA GTATCCAGAT CTTCCACACC GTGCTGCGCA CCGGTGACAA CAAGACGGTC
ATCATGCCCA ATGGCAGCCT GTCCAACGGC ATCATTACCA ACACCAACCG CCAGCCGACG
CGCAAGGTGG TGTTCGATGT GGGCGTTGAC TACGAGGCTG ACCTGCAGAA GGCCCGCAAT
GTGTTGCTGG AGCTGGCAAA GGACCCGCGT GTTCTGCAAG ACCCTGCACC GCAGGCGGTC
GTGTCGACGC TGGGCGACAG CTCGATCACC GTATCGCTGC GCTTGTGGAC CAAGACCTCC
GATTACTGGG ACGTGATGTT CATGCTCAAC GAGTATGCGC GTGACCGGTT GAAGGCCGAA
GGGATCGATA TTCCGTTTCC GCAGCGGGTT ATTCGCGTGG TGCAGGAGAC TGCAACGCAG
TAA
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| Protein sequence | MDLNAEVDQL VRQSQTWIPL IMEYGSRVLL ALLTLAVGWW IINKVSARLG KLVGLRNADL
ALQGFISTLA NIVLKVLLLV SVASMIGIET TSFVAAIGAA GLAIGLALQG SLANFAGGVL
ILMFRPFRIG DWIEAQGVAG TVDSIQIFHT VLRTGDNKTV IMPNGSLSNG IITNTNRQPT
RKVVFDVGVD YEADLQKARN VLLELAKDPR VLQDPAPQAV VSTLGDSSIT VSLRLWTKTS
DYWDVMFMLN EYARDRLKAE GIDIPFPQRV IRVVQETATQ
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