Gene Pput_4353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4353 
Symbol 
ID5194308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4871654 
End bp4872775 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content64% 
IMG OID640588830 
Productglycosyl transferase, group 1 
Protein accessionYP_001269660 
Protein GI148549558 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.144729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.010377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG TGCACATCGC CGACATCACC ATGTTCTACG CCCCGGCCAG CGGTGGCGTA 
CGTACCTATC TTGATGCCAA ACATCACCGT CTCGACGCCA TTCACGGCGT ACGCCACAGC
CTGTTGATTC CCGGTGCCAG CGCCCAACAC GGCGATGGCA TCTATCAGGT ACCTGCGCCA
CCCTTGCCGT TTGGCAAGGG CTACCGCTTT CCGGTACGCC TGGCCCCCTG GTGCAATACA
CTGCGCACGC TCAAACCCGA CCTGATTGAA GTTGGCGACC CCTACCTGAC CGCCTGGGCG
GCGCTGGAAG CGCGGCGCCA GCTCGACGTG CCCGTGATCG GTTTCTACCA TTCCGACCTG
CCGTTACTGG TCAGCAACCG CATGGGCAAC TGGTTCGCAC CCAATGTCGA GGCCTACGTC
AGCAAGCTAT ACGGCAATTT TGATCGGGTA TTGGCCCCCA GCCAGGTGAT GGCCGACAAA
TTACGCCGCT TGGGCGTGCG CGATGTCCAT GTGCAGCCGC TGGGCGTTGA CCTTGCCACT
TTCCACCCCT CCCGGCGCGA CCCACATGTG CGTGCCGAAC TGGGCATTCC CGACACCAGC
CGCCTGTTGA TCTTTGCCGG CCGCGGCTCG CGGGAGAAGA ACCTGCCGGT GCTGCTTGAC
TGCATGCAGC AACTCGGCGC CCCCTACCAC CTGTTACTGG TAGGCTCGAA CATGCCGGCC
AGCGTGCCGT CCAACGTCAG CGTCATCGAT CACTTCTGCC CGTCTGCCGA GGTGGCCCGG
CTGATCGCCA GCGCCGACTT GCTGGTGCAT GCTGGCGACC AGGAAACATT CGGCCTGGTC
ATTCTCGAAG CGATGGCCAG CGCCACCCCT GTGGTGGCCG TGCGCGCCGG TGCGTTCCCT
GAAATCATCA ACGAACAGTG TGGCCGCCTG TGCACGCCCA ACGATGGTCG GGCCATGGCG
TGCGCCGTGC GCGAGGCGTT CGAGGCGGGT ACCCGCGAGC TCGGCCTGCA GGCCCGCCAC
CATGTAGAGC AACATTATTC TTGGGATAAC GTGGTAGCTG GCCTGCTCCA GCACTACCAG
GCCGTGCTCG GCCACCAGCC GCAGGTGCGC GCCCATGCTT GA
 
Protein sequence
MLIVHIADIT MFYAPASGGV RTYLDAKHHR LDAIHGVRHS LLIPGASAQH GDGIYQVPAP 
PLPFGKGYRF PVRLAPWCNT LRTLKPDLIE VGDPYLTAWA ALEARRQLDV PVIGFYHSDL
PLLVSNRMGN WFAPNVEAYV SKLYGNFDRV LAPSQVMADK LRRLGVRDVH VQPLGVDLAT
FHPSRRDPHV RAELGIPDTS RLLIFAGRGS REKNLPVLLD CMQQLGAPYH LLLVGSNMPA
SVPSNVSVID HFCPSAEVAR LIASADLLVH AGDQETFGLV ILEAMASATP VVAVRAGAFP
EIINEQCGRL CTPNDGRAMA CAVREAFEAG TRELGLQARH HVEQHYSWDN VVAGLLQHYQ
AVLGHQPQVR AHA