| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4346 |
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| Symbol | |
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| ID | 5191270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4861325 |
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| End bp | 4862527 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588823 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001269653 |
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| Protein GI | 148549551 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.269292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0367853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG TATTCATCTG TGACGCCATC CGTACCCCGA TCGGCCGCTT TGGCGGCGCC
CTGGCCAGCG TGCGGGCCGA CGACCTGGCA GCCGTGCCGC TGAAGGCGCT GATCGAGCGC
AACCCTGGCG TGCAGTGGGA CCAGGTAGAC GAAGTGTTCT TCGGCTGCGC CAACCAGGCC
GGTGAAGACA ACCGCAACGT GGCCCGTATG GCACTGCTGC TGGCCGGCCT GCCGGAAAGC
ATCCCGGGCG TCACCTTGAA CCGCCTGTGC GCGTCGGGTA TGGATGCCAT CGGCACCGCG
TTCCGCGCCA TCGCCAGCGG CGAGATGGAA CTGGTGATTG CCGGTGGCGT CGAGTCGATG
TCGCGCGCCC CGTTCGTCAT GGGCAAGGCT GAAAGCGCCT ATTCGCGCAA CATGAAGCTG
GAAGACACCA CCATTGGCTG GCGTTTCATC AACCCGCTGA TGAAGAGCCA GTACGGTGTG
GATTCCATGC CGGAAACCGC CGACAACGTG GCTGACGACT ATCAGGTTTC GCGTGCCGAC
CAGGACGCTT TCGCCCTGCG CAGCCAGCAG AAGGCTGCCG CTGCACAGGC TGCCGGCTTC
TTTGCCGAAG AAATTGTGCC GGTGCGTATC GCTCACAAGA AGGGCGAAAT CATCGTCGAA
CGTGACGAAC ACCTGCGCCC GGAAACCACG CTGGAGGCGC TGACCAAGCT CAAACCGGTC
AACGGCCCGG ACAAGACGGT CACCGCCGGC AACGCCTCGG GCGTGAACGA CGGTGCTGCG
GCGATGATCC TGGCCTCGGC CGCAGCGGTG AAGAAACACG GCCTGACCCC GCGTGCCCGC
GTTCTGGGCA TGGCCAGCGG CGGCGTTGCT CCACGTGTCA TGGGCATTGG CCCGGTGCCG
GCGGTGCGCA AGCTGACCGA GCGTCTGGGG GTTGCGGTAA GCGATTTCGA CGTGATCGAG
CTTAACGAAG CATTTGCCAG TCAAGGCCTG GCGGTGCTGC GTGAGCTGGG TGTCGCTGAC
GATGCACCAC AGGTAAACCC TAATGGTGGC GCCATTGCCC TGGGCCATCC GCTGGGCATG
AGCGGTGCAC GCCTGGTGCT GACTGCGCTG CACCAACTGG AGAAGAGTGG TGGGCGTAAA
GGCCTGGCGA CCATGTGTGT GGGCGTTGGC CAAGGTCTGG CACTGGCCAT CGAGCGGGTT
TGA
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| Protein sequence | MHDVFICDAI RTPIGRFGGA LASVRADDLA AVPLKALIER NPGVQWDQVD EVFFGCANQA
GEDNRNVARM ALLLAGLPES IPGVTLNRLC ASGMDAIGTA FRAIASGEME LVIAGGVESM
SRAPFVMGKA ESAYSRNMKL EDTTIGWRFI NPLMKSQYGV DSMPETADNV ADDYQVSRAD
QDAFALRSQQ KAAAAQAAGF FAEEIVPVRI AHKKGEIIVE RDEHLRPETT LEALTKLKPV
NGPDKTVTAG NASGVNDGAA AMILASAAAV KKHGLTPRAR VLGMASGGVA PRVMGIGPVP
AVRKLTERLG VAVSDFDVIE LNEAFASQGL AVLRELGVAD DAPQVNPNGG AIALGHPLGM
SGARLVLTAL HQLEKSGGRK GLATMCVGVG QGLALAIERV
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