| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4345 |
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| Symbol | |
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| ID | 5194466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4859848 |
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| End bp | 4861137 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588822 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001269652 |
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| Protein GI | 148549550 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.446356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0102664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAA CCTATTACAC CGGCGAAGAA CGCAGCAAGC GCATCTTCGC TATTGTCGGT
GCCTCGTCAG GCAACCTGGT GGAATGGTTC GACTTCTACG TCTACGCCTT CTGCGCGATC
TACTTTGCCC CGGCCTTCTT CCCCTCCGAC GACCCCACCG TGCAGTTGCT GAACACGGCA
GGTGTATTCG CCGCAGGCTT CCTGATGCGC CCCATTGGTG GCTGGATCTT CGGCCGCCTC
GCCGACCGCC ACGGTCGCAA GAACTCCCTG ATGATCTCGG TGCTGATGAT GTGCTTCGGC
TCCCTGATGA TCGCCTGCCT GCCCACCTAT GCCAGCATCG GCACCTGGGC CCCGGCGCTG
CTATTGCTGG CCCGCCTGAT CCAGGGGCTG TCGGTAGGGG GCGAATACGG CACCACGGCC
ACCTACATGA GTGAAGTGGC ACTGCGTGGG CAGCGCGGCT TCTTTGCTTC GTTCCAGTAC
GTCACCCTGA TCGGCGGCCA GTTGCTGGCG GTATTGGTCG TGGTGATCCT GCAACAGCTG
CTGACTGAAG ATGAACTGCG GGCCTGGGGC TGGCGCATTC CCTTCGTGGT GGGGGCCATC
GCCGCCCTGA TCTCGCTGAT GTTGCGCCGT TCGCTGCACG AGACCAGTAG CGCCGAAGCC
CGCAATGACA AGGATGCAGG TTCTATCGCA GGCCTGTTCC GCAATCACGC AGCGGCGTTC
ATCACGGTAC TGGGCTACAC CGCGGGTGGC TCGCTGATTT TCTATACTTT CACCACCTAC
ATGCAGAAGT ACCTGGTCAA CACCGCGGGC ATGACAGCCA AGAACGCCAG CTACGTGATG
ACCGGGGCGT TGTTCCTGTT CATGGTGTTG CAGCCGTTCT TCGGCATGCT GTCCGACCGT
ATCGGTCGGC GCAATTCGAT GCTGCTGTTC GGCGGCCTCG GTACCCTGTG CACCGTGCCG
CTGCTGATGG CACTGAAAAC CGTGACCAGC CCGTTCATGG CCTTCGTGCT GATCAGCCTG
GCCCTGTGTA TCGTCAGTTT CTACACCTCG ATCAGCGGTC TGGTGAAGGC TGAGATGTTC
CCGCCGCAGG TGCGTGCACT GGGTGTTGGC CTGGCCTATG CGGTGGCGAA CGCAGCATTC
GGCGGTTCGG CCGAGTATGT GGCCCTGGGC CTGAAGACCC TGGGGATGGA AAACACTTTC
TATTGGTACG TCACGGCGAT GATGGCGATT GCCTTCCTGT TCAGCCTGCG CCTGCCGAAG
CAGGCGGCGT ACCTGCACCA TGATGACTAA
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| Protein sequence | MTSTYYTGEE RSKRIFAIVG ASSGNLVEWF DFYVYAFCAI YFAPAFFPSD DPTVQLLNTA
GVFAAGFLMR PIGGWIFGRL ADRHGRKNSL MISVLMMCFG SLMIACLPTY ASIGTWAPAL
LLLARLIQGL SVGGEYGTTA TYMSEVALRG QRGFFASFQY VTLIGGQLLA VLVVVILQQL
LTEDELRAWG WRIPFVVGAI AALISLMLRR SLHETSSAEA RNDKDAGSIA GLFRNHAAAF
ITVLGYTAGG SLIFYTFTTY MQKYLVNTAG MTAKNASYVM TGALFLFMVL QPFFGMLSDR
IGRRNSMLLF GGLGTLCTVP LLMALKTVTS PFMAFVLISL ALCIVSFYTS ISGLVKAEMF
PPQVRALGVG LAYAVANAAF GGSAEYVALG LKTLGMENTF YWYVTAMMAI AFLFSLRLPK
QAAYLHHDD
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