| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4344 |
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| Symbol | |
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| ID | 5194465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4858486 |
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| End bp | 4859838 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588821 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_001269651 |
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| Protein GI | 148549549 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.339693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0393048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC AACTGTTCGA CGCCTATTTC ACCGCGCCGG CCATGCGCGA GATTTTCTCC
GACCGTGGCC GCCTGCAGGG CATGCTGGAT TTCGAAGCAG CGCTTGCCCG TGCCGAAGCC
TCTGCCGGTT TGGTCCCGCA CAGCGCGGTA GCAGCCATCG AGGCGGCATG CCAGGCCGAG
CGCTATGACG TTGGTGCGTT GGCCAATGCC ATCGCCACCG CCGGCAACTC GGCCATTCCG
CTGGTGAAAG CGTTGGGCAA GGTGATCGCC ACTGGCGTAC CTGAGGCTGA GCGCTATGTG
CACCTTGGGG CCACCAGTCA GGATGCGATG GACACGGGTC TGGTTCTGCA GCTGCGCGAT
GCCCTCGATT TGATCGAGGC CGACCTCGGC AAGCTGGCCG ATACCCTGTC GCAGCAGGCC
TTGAAGCACG CCGATACGCC ATTGGTGGGT CGTACCTGGT TGCAACACGC CACCCCGGTG
ACTCTGGGCA TGAAACTGGC CGGTGTACTG GGGGCTTTGA CCCGCCACCG TCAGCGCCTG
CAGGAACTGC GCCCGCGCCT GCTGGTCCTG CAGTTCGGCG GTGCCTCGGG CAGCCTGGCG
GCCCTGGGCA GCAAGGCAAT GCCGGTGGCC GAAGCGCTGG CCGAACAGCT CAAGCTGTCC
CTGCCCGAGC AGCCCTGGCA CACCCAACGC GACCGCCTGG TGGAGTTTGC CTCGGTGCTG
GGCCTGGTTG CCGGCAGCCT GGGCAAGTTT GGCCGTGATA TCAGCTTGCT GATGCAAACC
GAGGCGGGGG AGGTATTTGA GCCTTCTGCG CCGGGCAAGG GGGGTTCTTC GACCATGCCA
CACAAGCGCA ACCCGGTGGG TGCCGCCGTG TTGATCGGTG CCGCAACCCG CGTGCCGGGC
CTGCTGTCGA CGCTGTTTGC AGCCATGCCT CAGGAGCACG AACGCAGCCT GGGCCTATGG
CATGCCGAGT GGGAAACCCT GCCGGACATC TGCTGCCTGG TCTCGGGTGC CCTGCGCCAG
GCTCAAGTGA TTGCCGAGGG CATGGAGGTG GATGCCGCGC GCATGCGCCG TAACCTCGAC
CTGACACAAG GCCTGGTGCT GGCTGAGGCG GTTAGCATCG TCCTCGCCCA GCGTCTGGGT
CGCGACCGTG CCCACCACCT GCTGGAACAA TGCTGCCAGC GCGCGGTGGC CGAACAGCGG
CACCTGCGTG CCGTGCTGGG TGACGAGCCG CAGGTCAGCG CCGAGCTGTC TGGCGAAGAA
CTCGATCGCC TGCTCGACCC TGCCCATTAC CTGGGCCAGG CCCGCGTCTG GGTGGCGCGC
GCCGTGTCCG AACATCAACG TTTTACTGCC TGA
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| Protein sequence | MSNQLFDAYF TAPAMREIFS DRGRLQGMLD FEAALARAEA SAGLVPHSAV AAIEAACQAE
RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV HLGATSQDAM DTGLVLQLRD
ALDLIEADLG KLADTLSQQA LKHADTPLVG RTWLQHATPV TLGMKLAGVL GALTRHRQRL
QELRPRLLVL QFGGASGSLA ALGSKAMPVA EALAEQLKLS LPEQPWHTQR DRLVEFASVL
GLVAGSLGKF GRDISLLMQT EAGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG
LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV DAARMRRNLD
LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR HLRAVLGDEP QVSAELSGEE
LDRLLDPAHY LGQARVWVAR AVSEHQRFTA
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