| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4335 |
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| Symbol | |
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| ID | 5193551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4846585 |
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| End bp | 4848036 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588812 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001269642 |
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| Protein GI | 148549540 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.39024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG CTCTGCCCCC CACCGCCCTG CGCAACGTGC TCACCGCCCT GATGCTGGCC
ATCTTCCTCG GCGCACTGGA CCAGACCATC GTTGCCGTCT CGCTGCCCGC CATCTCGGCG
CAGTTCAGCG ATGTCGGCCT GCTGGCCTGG GTCATCTCCG GTTATATGGT GGCCATGACC
GTGGCCGTGC CGATCTACGG CAAACTGGGC GACCTTTACG GCCGGCGCCG GATGATCCTC
ACCGGCATCA GCCTGTTCAC CCTGGCCTCC ATTGCCTGCG CCATGGCCCA GGACATGCCG
CAACTGGTGC TGGCCCGGGT ACTGCAGGGT ATCGGCGCAG GCGGGATGGT CTCGGTGAGC
CAGGCAATCA TTGGCGACTT CGTGCCCCCA CGCGAACGCG GCCGCTACCA GGGCTACTTC
AGCAGCATGT ACGCCGCGGC CAGCGTGGCC GGGCCAGTGC TGGGCGGCTG GTTGACCGAG
TACCTGTCGT GGCGCTGGGT GTTCTGGATC AACCTGCCGC TGGGGCTGGT CGCCTTGTGG
GCCATTCGCC GTGCGCTCGC TGACATGCCG GTGCAGCGTC GCGAGGCACA GGTGGACTAC
CTTGGCGCCA TGCTGTTGAT TCTCGGCCTT GGCAGCCTGC TGCTGGGCAT TACCTTGGTG
GGCCAGGGCC ACGCCTGGGC CGACCCGGCC GTGCTGGCGC TGTTCGGCTG CGCCCTGCTG
GGCCTGGCGC TTTTCATCGC ACACGAACGC CGCTGCCCAG AACCGCTGCT GCCGCTCAGC
CTGTTCGGCA ACCGTGTGGC AGTGCTGTGC TGGGCGGTGA TCTTCTTCGC CAGCTTCCAG
TCCATTTCCC TGACCATGCT GATGCCCTTG CGTTACCAGG GCATTACCGG CGCCGGTGCC
GACAGCGCCG CCCTGCATCT GCTGCCGCTG GCCATGGGGC TGCCCATGGG CGCCTTCACA
GGAGGCCGGA TGACCAGCCG GACCGGGCGC TACAAGCCAC AGATCCTGGC CGGTGCACTG
CTGATGCCAG TGGCCATTTT CGCGATGGCA CTGACTCCGC CGCAATCAGC GTTGCTCAGT
GCGCTGTGCA TGCTGCTGAC CGGTATAGCC TGCGGGCTGC AATTCCCGAC CTCACTGGTG
GGTACACAAA GTGCGGTGGC CAGCAAGGAC ATCGGCGTGG CCACCAGCAC CACCAACCTG
TTCCGCTCGC TGGGCGGAGC CATGGGCGTA GCGTGCATGT CCAGCCTGTT GCTGGCACTG
CTGCATCAAG GTGGTTTCGA CTTGACGGGT AACCCGTTGC TGGGGAGTTT GAAGGCCGCA
GAGGTGGACC TGGTGACTCA AGGGCGGTTG CTGGAGACGT TCAGGCAACT GCTGATGGGG
AGTGCGCTCG TCGCGGTGCT GGGACTGTTC GCGGCATTTG CTTTGCCTGA CCGGCAATTG
CGCGGCCGCT GA
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| Protein sequence | MTAALPPTAL RNVLTALMLA IFLGALDQTI VAVSLPAISA QFSDVGLLAW VISGYMVAMT
VAVPIYGKLG DLYGRRRMIL TGISLFTLAS IACAMAQDMP QLVLARVLQG IGAGGMVSVS
QAIIGDFVPP RERGRYQGYF SSMYAAASVA GPVLGGWLTE YLSWRWVFWI NLPLGLVALW
AIRRALADMP VQRREAQVDY LGAMLLILGL GSLLLGITLV GQGHAWADPA VLALFGCALL
GLALFIAHER RCPEPLLPLS LFGNRVAVLC WAVIFFASFQ SISLTMLMPL RYQGITGAGA
DSAALHLLPL AMGLPMGAFT GGRMTSRTGR YKPQILAGAL LMPVAIFAMA LTPPQSALLS
ALCMLLTGIA CGLQFPTSLV GTQSAVASKD IGVATSTTNL FRSLGGAMGV ACMSSLLLAL
LHQGGFDLTG NPLLGSLKAA EVDLVTQGRL LETFRQLLMG SALVAVLGLF AAFALPDRQL
RGR
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