| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4320 |
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| Symbol | |
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| ID | 5190888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4830496 |
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| End bp | 4832787 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588797 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001269627 |
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| Protein GI | 148549525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC TGTCTTTGCT GGGCCTGGCC ATGGGCCTTG CCAGTCAGGC GGCCCTCGCC
GCCCCCACCG CCCCGCCCCT GCAGGACAAG CAGGCATTCA TCGAGCATCT GATCAGCCAG
ATGACCGAAG CCGAGAAAAT CGGCCAGTTG CGCCTGATCA GCATCGGCCC GGAAATGCCC
CGCGACAAGA TCCGCGAGGA AATCGCCGCC GGCCGTATCG GTGGCACCTT CAACTCCCGC
ACGGCCCCCG AAAACCGGCC GATGCAGGAC GCGGCAATGC GCAGCCGCCT GAAGATCCCG
ATGTTCTTCG CCTACGACAC CGTCCACGGC GAGCGCACCA TCTTCCCGAT CGGCCTGGGC
ATGGCCGCTA CCTGGGACAT GGAGGCCGTC GCCAAGGTCG GCCGCACCGC CGCGATCGAA
GCCTCGGCCG ACGCCCTGGA CATGACGTTC GCGCCAATGG TGGATATCGC CCGTGACCCG
CGCTGGGGCC GCACCAGTGA AGGTTTCGGC GAAGACACCT ACCTGACCTC GAGAATCGGC
CAGGTAATGG TGCGCTCGTT CCAGGGCAGC AGCCCGGCCA ACCCCGACAG CATCATGGCC
ATCGTCAAAC ATTTCGCCTT GTATGGCGCC GTGGAAGGCG GGCGCGACTA CAACACGGTC
GATATGAGCC TGCCGAAAAT GTACAACGAC TACCTGCCAC CCTATCGCGC CGCGCTCGAT
GCGGGTGCCG GTGGCGTGAT GGTGGCGCTG AACTCGATCA ACGGCGTACC GGCCACCTCC
AACACCTGGC TGATGAACGA CCTGCTGCGC AAGGAGTGGG GCTTCAAGGG CGTGACCATC
AGCGACCACG GTGCCATCCA GGAGCTGATT CGCCACGGCG TCGCCCGTGA TGGCCGTGAA
GCCGCCAAGC TGGCGATCAA GGCCGGCATC GACATGAGCA TGAACGATAC CCTGTACGGC
GAAGAGCTAC CGGGCCTGCT GAAGTCCGGT GAGGTGACCC AGCGCGAGCT GGACCAGGCG
GTGCGTGAAG TGCTGGGTGC CAAGTACGAC ATGGGCCTGT TCAAAGACCC GTACGTGCGC
ATCGGCAAGG CCGAAACCGA CCTGAAGGAC TACTACGGCA ACGACCGCCT GCACCGCGAA
GCTGCGCGTG ACGTGGCACG CCGCAGCCTG GTGCTGCTGG AAAACCGCAA CCAGACCCTG
CCGCTGAAAA AGACCGGCAC CATTGCCTTG GTCGGCCCAT TGGCCGATGC CCCGATCGAC
ATGATGGGCA GTTGGGCCGC CGACGGTAAG CCCGTTCACT CGGTGACCGT GCGCGAAGGC
TTGCGCCGCG CCGTGGAGGG CAAGGCCAAG CTGGTCTACG CCAAAGGCTC CAACGTCACG
GGCGACAAGG CGATCTTCGA TTACCTGAAC TTCCTCAACT TCGATGCCCC GGAAATCGTC
GACGACCCAC GCCCGCCTGC CGTGCTGATC GATGAAGCAG TCAAGGCGGC GAAGCAATCC
GACGTCGTGG TCGCAGTGGT CGGCGAGTCC CGTGGCATGT CCCACGAGTC GTCGAGCCGC
ACCACCCTGG AGATCCCTGC CAGCCAGCGC GAGCTGATCA AGGCGCTCAA GGCCACCGGC
AAACCGCTGG TGCTGGTGTT GATGAACGGC CGGCCGCTGT CGATCAGCTG GGAGCGCGAG
CAGGCCGACG CCATCCTCGA AACCTGGTTC GCCGGCACCG AAGGCGGCAA TGCCATCGCC
GACGTGCTGT TTGGCGACTA CAACCCCTCC GGCAAGCTGG CCATTACCTT CCCACGGTCG
GTGGGGCAGA TCCCGATGTA CTACAACCAC ACCCGCATCG GCCGGCCGTT CACGCCGGGT
AAGCCGGGCA ACTACACCTC GCAATACTTC GAAGAACCCA ACGGGCCGCT TTACCCGTTC
GGCTATGGCT TGAGCTACAG CAGCTTCGAG CTGTCGGGCC TGAACCTGTC GAGCAAGGAT
CTCAAGCGCG GCGATACGCT GGAAGCCAAG GTAACGGTCA AGAACTCCGG CAAGGTTGCA
GGCGAGACGG TGGTGCAGCT GTACCTGCAG GATGTGTCGG CGTCGATGAG CCGCCCAGTG
AAAGAGCTGA AAAACTTCCA GAAGCTGATG CTTGAACCGG GTGAAACCCG CACGTTGACC
TTCCGCATCA GCGAGGACGA CCTGAAGTTC TACAATGGCC AGTTGCAGCG GGTTGCCGAA
CCAGGGGAGT TCAATGTCCA GGTAGGGCTG GACTCCCAGG CGGTGCAGCA GCAGAGCTTT
GAATTGCTTT GA
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| Protein sequence | MMKLSLLGLA MGLASQAALA APTAPPLQDK QAFIEHLISQ MTEAEKIGQL RLISIGPEMP
RDKIREEIAA GRIGGTFNSR TAPENRPMQD AAMRSRLKIP MFFAYDTVHG ERTIFPIGLG
MAATWDMEAV AKVGRTAAIE ASADALDMTF APMVDIARDP RWGRTSEGFG EDTYLTSRIG
QVMVRSFQGS SPANPDSIMA IVKHFALYGA VEGGRDYNTV DMSLPKMYND YLPPYRAALD
AGAGGVMVAL NSINGVPATS NTWLMNDLLR KEWGFKGVTI SDHGAIQELI RHGVARDGRE
AAKLAIKAGI DMSMNDTLYG EELPGLLKSG EVTQRELDQA VREVLGAKYD MGLFKDPYVR
IGKAETDLKD YYGNDRLHRE AARDVARRSL VLLENRNQTL PLKKTGTIAL VGPLADAPID
MMGSWAADGK PVHSVTVREG LRRAVEGKAK LVYAKGSNVT GDKAIFDYLN FLNFDAPEIV
DDPRPPAVLI DEAVKAAKQS DVVVAVVGES RGMSHESSSR TTLEIPASQR ELIKALKATG
KPLVLVLMNG RPLSISWERE QADAILETWF AGTEGGNAIA DVLFGDYNPS GKLAITFPRS
VGQIPMYYNH TRIGRPFTPG KPGNYTSQYF EEPNGPLYPF GYGLSYSSFE LSGLNLSSKD
LKRGDTLEAK VTVKNSGKVA GETVVQLYLQ DVSASMSRPV KELKNFQKLM LEPGETRTLT
FRISEDDLKF YNGQLQRVAE PGEFNVQVGL DSQAVQQQSF ELL
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