| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4319 |
|---|
| Symbol | |
|---|
| ID | 5193355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4829692 |
|---|
| End bp | 4830309 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588796 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269626 |
|---|
| Protein GI | 148549524 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3762] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCT TCGACGAATA CCATCAACGG CAGATTGCCG AAGCCATTGC CCGTGCCGAA
CGGCGTACCG ATGCCGAACT GGTGACGGTG CTTGCCCGTC GTGCCGACGA TTATGCGTAT
TGGCCGTTGT TGTGGGCCGC CGTGCTGGCA CTGACCGTGC CTGGTCTGTT GCACTGGCTG
CTGGCTTGGC CCAGCGTGCG TGGCGTGCTG ATGGGCAACG TGCTGCTGTT CGTCGTTTTG
TGCCTGCTGC TGCGCAACCC GCGCCTGGCC GATTGGCTGA TCCCCCGTGC CTTGCGCCGC
TGGCGTGCCG CGCGCCTGGC CCGCCAGCAG TTTCGCGAGC AGAACCTGCA GCGCACAGCA
GGCGCCACGG GCGTGCTGAT TTTCGTCAGC GAGGCGGAGC GGCATGTGGA GATCCTGGTC
GACCGGGGTA TCGAACACTG CCTGGATGCC GAAGCCCGCG CGGCCATCGG TGCCCGTTTG
GCCGAGCAGG TGCGCCAGGG CCGCACCTTG CAGGGCTTTG TCGAGTGCAT TGAAGCGTGT
GGCGAGCTGC TTAGCCAGCA CGTGCCGCCA ACCCATGCCC GCAACGAATT GCCCAACCGC
TTGGTGATTC TCGACTGA
|
|---|
| Protein sequence | MTPFDEYHQR QIAEAIARAE RRTDAELVTV LARRADDYAY WPLLWAAVLA LTVPGLLHWL
LAWPSVRGVL MGNVLLFVVL CLLLRNPRLA DWLIPRALRR WRAARLARQQ FREQNLQRTA
GATGVLIFVS EAERHVEILV DRGIEHCLDA EARAAIGARL AEQVRQGRTL QGFVECIEAC
GELLSQHVPP THARNELPNR LVILD
|
|---|
| |