Gene Pput_4318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4318 
Symbol 
ID5193354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4828312 
End bp4829526 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content62% 
IMG OID640588795 
Producthypothetical protein 
Protein accessionYP_001269625 
Protein GI148549523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.234273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA GTACTTCTGC CTCTTGCGCG CCGGATGCGC GCGCTCAGTT TCTCGACCTG 
CTGAACGCCG CCCTGCACGG CGAAACCCTG GTCAAGCTGG TGCTGGCGCG CCATGTCGGT
GCCGACCAGA CCTTGCAACG GATCATTGCC AAGCCGTTGC AGGTCAAGGG CCAGCCGTGC
CTGTCGCTGG TCTACCGCCA CCAGACCCGC GACATCACCC GCAACCTGCC GCTGGACCAG
GCCAAGGTGC TGGTTGCCGA ACTGCTGCCA GACAGCTTCC GCAATGCTCA CCTGTTCGAT
GCTGACGGCG AAGTGCAGTT GACCTTCAGC AAGAAGGGCA AACCGATGCT CCAGCGCCAC
GGTGCCCAGG CACCGCGCGT GGCCGATGCG GGCAGCGGGC ATGACCGCGA GAAGAAGCGT
TATCTGGAGC TGTCGCGGCC GTTTCTGCGT GACCTCGGTG TGACCGACGC ACAAGGCGCA
CTGATCCCGT CCATGTCACG CAAGTGGAAG CAGATCAACA AATTCATCGA GGTCTTCGAT
CACGCCCTGG CCAATGCACC GGTGTCGACG GAACAGGCGC TGCGGGTGGC CGACTTCGGT
TCGGGCAAGG GCTACCTGAC CTTTGCCATG CATGACTACC TGCGCAATAG TTTGGGCCGT
GACGCACAGG TGACCGGCGT GGAGCTGCGC CAGGACATGG TCGACCTGTG CAACGCCGCG
GCCGCACGCC TCGACCACCC GGGCCTGGAG TTCCAGTGTG GTGATGTACG CAGCGTGGTG
CCTGAGGCCA TCGAGGTGAT GATCGCCTTG CATGCCTGTG ACATCGCCAC TGACTACGCC
ATCCACACCG GCATCCGCTG CAACGCCGCG ATCATCATGT GCTCGCCGTG CTGCCACAAG
CAGATCCGCC CGCAATTGCA CAGCCCAGGG TTGCTGCAAC CCATGCTGCA GTATGGCCTG
CACCTGGGCC AGCAGGCCGA AATGCTGACC GACAGCCTGC GTGCGCTGTA CCTGGAAGCC
TGTGGCTATG AAACCAAGGT GTTCGAGTTC ATCTCGCTGG AACATACCAA CAAGAACAAG
ATGATTCTTG CGGTGAAACG GCGGCAGGCG GGGGATAATG GGGCGTTGCT GGAGAAGATT
GCCCAGCTCA AGGCGTTCTA TGGGGTGCAG GAGCATTGCC TGGAAACGTT GTTGCGCGCG
GATGGGTTGC TCTGA
 
Protein sequence
MSASTSASCA PDARAQFLDL LNAALHGETL VKLVLARHVG ADQTLQRIIA KPLQVKGQPC 
LSLVYRHQTR DITRNLPLDQ AKVLVAELLP DSFRNAHLFD ADGEVQLTFS KKGKPMLQRH
GAQAPRVADA GSGHDREKKR YLELSRPFLR DLGVTDAQGA LIPSMSRKWK QINKFIEVFD
HALANAPVST EQALRVADFG SGKGYLTFAM HDYLRNSLGR DAQVTGVELR QDMVDLCNAA
AARLDHPGLE FQCGDVRSVV PEAIEVMIAL HACDIATDYA IHTGIRCNAA IIMCSPCCHK
QIRPQLHSPG LLQPMLQYGL HLGQQAEMLT DSLRALYLEA CGYETKVFEF ISLEHTNKNK
MILAVKRRQA GDNGALLEKI AQLKAFYGVQ EHCLETLLRA DGLL