| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4316 |
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| Symbol | |
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| ID | 5193359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4825359 |
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| End bp | 4827065 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588793 |
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| Product | sulfate transporter |
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| Protein accession | YP_001269623 |
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| Protein GI | 148549521 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00416357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTCT CCCGCTGGCT ACCGGGCCTT GCCAACCTGC TGCACTACCG CCGTGAATGG
TTCCACGCCG ATCTGCAAGC GGGCCTGTCG GTAGCCGCGA TCCAGATTCC CATTGCCATT
GCCTATGCGC AGATCGTCGG CCTGCCGCCG CAATATGGCC TGTACGCCTG TGTGCTACCG
ATGATGGTCT ACGCGCTGAT CGGTAGCTCG CGCCAGCTGA TGGTCGGCCC CGACGCCGCC
ACCTGCGCGA TGATCGCCGG TGCCGTGGCA CCGCTGGCCC TGGGCGACCC GCAGCGCATC
GTCGAACTGT CGGTGATCGT CACCGTGCTG GTCGGCGTGA TGCTGATTGC CGCGGGCCTG
GCGCGCGCCG GGTTCATCGC CAGCTTCTTC TCGCGGCCGA TCCTGATCGG CTACCTCAAC
GGTATCGGCC TGAGCCTGAT CGCCGGGCAG CTGTCCAAGG TGGTGGGCTT CCAGATCGAG
GGCGACGGTT TCATCCTCAG CCTGATCAAC TTCTTCCAGC GCCTGGGGGA AATTCACTGG
GTCACATTGA TCATCGGCCT GGCCGCCCTG GGCCTGCTCA TCTGGCTGCC ACGGCGCTAC
CCGCGTCTGC CCGCAGCCCT CACGGTAGTG GCGCTGTTCA TGCTGCTGGT TGGCCTGTTC
GGCCTCGACC GCTTCGGCGT TGCCGTCCTT GGGCCGGTAC CTGCAGGCAT CCCGCAACTG
GCCTGGCCAC ACAGCAACCT GGCGGAAATG AAGAGCCTGC TGCGCGACGC CCTGGGTATC
GCCACCGTCA GCTTCTGCAG CGCCATGCTT ACCGCACGCA GCTTTGCCGC CCGGCATGGC
TATGCGATCA ACGCCAACCA CGAATTCGTC GCCCTGGGCG TGAGCAACCT GGCGGCCGGG
GTTTCCCAGG GCTTTGCCAT CAGCGGTGCC GACTCGCGCA CTGCAGTCAA CGACATGGTC
GGTGGCAAAA GCCAGCTGGT GGGCATCATC GCGGCACTGG TGATCGCCCT GATCCTGCTG
TTCTTCACCG CACCCATGGC CTGGATCCCG CAGGCTGCGC TGGGCGCCGT GCTGCTGATG
GCTGGCTGGG GGCTGATCGA CATCAAATCG CTGGGGCATA TCCGGCGTCT AAGCCGCTTC
GAGTTCTGGC TGTGCCTGCT GACCACGGCG GGCGTACTGG GCCTGGGCGT GCTGCCCGGC
ATCGTGTTTG CCGTGACCCT GGCGATCCTG CGCCTGCTTT ACAGCATCTA CCAACCCACC
GATGCCGTAC TGGGCTGGCT GCCGGGCACC GAAGGCCAGG TGGACATCCG CAAGTTCAAA
GACGCCCGCA CCGTGCCTGG TCTGGTGGTG TACCGCTTCG ACGACGCCAT CCTGTTCTTC
AATGCCGACT ACTTCAAGAT GCGCCTGCTT GAAGCCGTGC AAAGCCAGGA CCAGCCTAAA
GCCGTGCTGT TCGATGCCGA AGCGGTAACC AGCATTGATG TCAGCGGCAT CGCCGCCCTG
CGCGAAGTGC GTGACACCCT GGCGGCTCAA GGCATCCTCT TCGCCATCGC CCGCGCCCGT
GGCACTTTCC TGCGCATGCT GGTGCGCTCG GGGATGGCGC GGGACATGGA AGAAAAACTG
CTATTCGGCT CGGTACGCGC GGGGATTCGT GCGTACCGCG TGTGGCGCAA CCGAAACCGC
AGTGTGCAAG TGACCGAACA GGGTTAG
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| Protein sequence | MFLSRWLPGL ANLLHYRREW FHADLQAGLS VAAIQIPIAI AYAQIVGLPP QYGLYACVLP
MMVYALIGSS RQLMVGPDAA TCAMIAGAVA PLALGDPQRI VELSVIVTVL VGVMLIAAGL
ARAGFIASFF SRPILIGYLN GIGLSLIAGQ LSKVVGFQIE GDGFILSLIN FFQRLGEIHW
VTLIIGLAAL GLLIWLPRRY PRLPAALTVV ALFMLLVGLF GLDRFGVAVL GPVPAGIPQL
AWPHSNLAEM KSLLRDALGI ATVSFCSAML TARSFAARHG YAINANHEFV ALGVSNLAAG
VSQGFAISGA DSRTAVNDMV GGKSQLVGII AALVIALILL FFTAPMAWIP QAALGAVLLM
AGWGLIDIKS LGHIRRLSRF EFWLCLLTTA GVLGLGVLPG IVFAVTLAIL RLLYSIYQPT
DAVLGWLPGT EGQVDIRKFK DARTVPGLVV YRFDDAILFF NADYFKMRLL EAVQSQDQPK
AVLFDAEAVT SIDVSGIAAL REVRDTLAAQ GILFAIARAR GTFLRMLVRS GMARDMEEKL
LFGSVRAGIR AYRVWRNRNR SVQVTEQG
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