| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4315 |
|---|
| Symbol | |
|---|
| ID | 5193358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4824076 |
|---|
| End bp | 4824963 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640588791 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001269622 |
|---|
| Protein GI | 148549520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0387901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCAG AAATCGCTGT ACTTGATATC CAAGGTCAGT ATCGGGTTTA CACGGAGTTC
TATCGCGCGG ATGCGGCCGA AAACACGATC ATCCTGATCA ACGGCTCGCT GGCCACCACG
GCCTCGTTCG CCCAGACGGT ACGTAACCTG CACCCACAGT TCAACGTGGT TCTGTTCGAC
CAGCCGTATT CAGGCAAGTC CAAGCCGCAC AACCGTCAGG AACGGCTGAT CAGCAAGGAG
ACCGAGGCGC ATATCCTCCT TGAGCTGATC GAGCACTTCC AGGCAGACCA CGTGATGTCT
TTTTCGTGGG GTGGCGCAAG CACGCTGCTG GCGCTGGCGC ACCAGCCGCG GTACGTGAAG
AAGGCAGTGG TGAGTTCGTT CTCGCCAGTG ATCAACGCGC CGATGCGCGA CTATCTGGAC
CGTGGCTGCC AGTACCTGGC CGCCTGCGAC CGTTATCAGG TCGGCAACCT GGTCAATGAC
ACCATCGGCA AGCACTTGCC GTCGCTGTTC AAACGCTTCA ACTACCGCCA TGTGAGCAGC
CTGGACAGCC ACGAGTACGC ACAGATGCAC TTCCACATCA ACCAGGTGCT GGAGCACGAC
CTGGAACGTG CGCTGCAAGG CGCGCGCAAT ATCAACATCC CGGTGCTGTT CATCAACGGC
GAACGCGACG AGTACACCAC AGTGGAAGAT GCGCGGCAGT TCAGCAAGCA TGTGGGCAGA
AGCCAGTTCA GCGTGATCCG CGATGCGGGC CACTTCCTGG ACATGGAGAA CAAGACCGCC
TGCGAGAACA CCCGCAGTGT CATGCTAGGG TTCCTCAAGC CAACCGTGCG TGAACCCCGC
CAACGTTACC AACCCGTGCA ACAGGGGCAG CATGCATTTG CCATCTGA
|
|---|
| Protein sequence | MRPEIAVLDI QGQYRVYTEF YRADAAENTI ILINGSLATT ASFAQTVRNL HPQFNVVLFD
QPYSGKSKPH NRQERLISKE TEAHILLELI EHFQADHVMS FSWGGASTLL ALAHQPRYVK
KAVVSSFSPV INAPMRDYLD RGCQYLAACD RYQVGNLVND TIGKHLPSLF KRFNYRHVSS
LDSHEYAQMH FHINQVLEHD LERALQGARN INIPVLFING ERDEYTTVED ARQFSKHVGR
SQFSVIRDAG HFLDMENKTA CENTRSVMLG FLKPTVREPR QRYQPVQQGQ HAFAI
|
|---|
| |