Gene Pput_4303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4303 
Symbol 
ID5192617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4812713 
End bp4813693 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID640588780 
Producthypothetical protein 
Protein accessionYP_001269611 
Protein GI148549509 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.644034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CACTGCGCCG CCTCGTCCTC GCTACCGGCT GCCTGCTGTT GGCCGGCAAC 
GCCCTCGCTG CAGAACCGAA ACGCCCCGAA TGCATCGCAC CCGCCTCCCC TGGCGGTGGC
TTCGACCTGA CCTGCAAGCT GGTGCAAAGC GCACTGGTAC AAGAAAAAAT CCTCAGCAAG
CCGATGCGCG TCACCTACAT GCCCGGCGGT GTCGGCGCGG TCGCGTACAA CGCCGTGGTC
GCCCAGCGCC CGGCAGACGC CGGCACGCTG GTGGCCTGGT CCAGCGGCTC GCTGCTTAAC
CTGGCCCAGG GCAAGTTCGG CCGTTTCGAC GAAAACGCGG TGAAATGGCT GGCTGCCGTC
GGCACCAGCT ACGGTGCCAT CGCAGTGAAG AGCGACTCGC CCTACAAGAC CCTTGATGAC
TTGGTCGCAG CGCTGAAGAA AGACCCGAGC AAGGTCGTGA TCGGTTCCGG CGGTACCGTC
GGCAGCCAGG ACTGGATGCA GACCGCGTTG ATCGCCAAGG CCGCAGGCAT AAACCCGCGC
GACCTGCGCT ACGTGGCCCT GGAGGGCGGC GGCGAAATCG CCACGGCATT GCTGGGCGGC
CATATCCAGG TCGGTTCTAC CGACATTTCC GACTCCATGC CGCACATCCA GAGCGGCAAC
ATGCGCATCC TCGCGGTGTT CTCTGAAAAC CGCCTGGACG AGCCGGAAAT GAAAGACATC
CCTACTGCCA AGGAGCAGGG CTACGACATC GTCTGGCCGG TGGTGCGCGG TTTCTACCTG
GGGCCAAAAG TGAGCGACGA GGACTACGCC TGGTGGAAGG CCTCGTTCGA CAAGATGCTG
GCCTCCGAGG ACTTCGCCAA GCTGCGAGAC CAGCGCGAGC TGTTCCCGTT CGCCATGACC
GGCGAAGAGC TGGACGGCTA TGTGAAGAAG CAAGTGGCTG ACTACAAGGC ACTGGCCAAG
GAATTCGGCC TGATCCAGTA A
 
Protein sequence
MTFSLRRLVL ATGCLLLAGN ALAAEPKRPE CIAPASPGGG FDLTCKLVQS ALVQEKILSK 
PMRVTYMPGG VGAVAYNAVV AQRPADAGTL VAWSSGSLLN LAQGKFGRFD ENAVKWLAAV
GTSYGAIAVK SDSPYKTLDD LVAALKKDPS KVVIGSGGTV GSQDWMQTAL IAKAAGINPR
DLRYVALEGG GEIATALLGG HIQVGSTDIS DSMPHIQSGN MRILAVFSEN RLDEPEMKDI
PTAKEQGYDI VWPVVRGFYL GPKVSDEDYA WWKASFDKML ASEDFAKLRD QRELFPFAMT
GEELDGYVKK QVADYKALAK EFGLIQ