Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4301 |
Symbol | |
ID | 5193422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4810505 |
End bp | 4811176 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588778 |
Product | two component transcriptional regulator |
Protein accession | YP_001269609 |
Protein GI | 148549507 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.285594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTGC TACTGGTCGA AGACCACCTG CAACTGGCCG AAAGCGTGGC CCTGGCCTTG AAAAGCCATG GCCTGACCGT AGATGTGCTG CATGACGGCG TGGCTGCCGA CTTGGCGCTG GCCAGTGAGG AATACGCCGT GGCCGTGTTG GATGTCGGCC TGCCGCGCAT GGACGGCTTT GAGGTACTGG CGCGCTTGCG AGGCCGTGGC AAAACCTTGC CAGTGCTGAT GCTGACTGCG CGCAGCGACG TCAAGGACCG GGTCCATGGC CTGAACCTGG GCGCCGACGA TTATCTGGCC AAGCCGTTTG AGCTGACCGA GCTGGAAGCG CGGGTCAAGG CCTTGCTGCG CCGCAGTGTG CTCGGTGGCG AGCGACAGCA ACGCTGTGGG CCGTTGGTGT ATGACCTGGA CACCCGGCGC TTCACCCTCG GTGATGACAA CCTGACGCTG ACCTCACGCG AGCAGAGTGT GCTGCAAGCG CTGATCGCCC GCCCGGGCCG GGTGATGAGC AAGGAGCAGC TGGCTGCCCA GGTGTTTGGC CTGGACGAAG AAGCCAGCCC TGACGCCATC GAAATCTATA TTCACCGCCT GCGCAAGAAG CTCGACGGGC ACCCCGTAGC CATCGTCACT TTCCGTGGTC TGGGTTATTT GCTTGAGCAC CGCGATGCGT GA
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Protein sequence | MRVLLVEDHL QLAESVALAL KSHGLTVDVL HDGVAADLAL ASEEYAVAVL DVGLPRMDGF EVLARLRGRG KTLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELTELEA RVKALLRRSV LGGERQQRCG PLVYDLDTRR FTLGDDNLTL TSREQSVLQA LIARPGRVMS KEQLAAQVFG LDEEASPDAI EIYIHRLRKK LDGHPVAIVT FRGLGYLLEH RDA
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